Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1382 ATGGATCGGCCGTCGACCGGAGCAGGCGTGGACATGCCGATCATGCACGATAGCGACCGCTACGATTTCGTTCGCGATATTGGCTCTGGGAATTTCGGCGTCGCCAGGCTTATGAGGGATAAGCAAACGCAGGAGCTCGTTGCTGTTAAGTATATTGAACGCGGAGACAAGATTGATGAAAATGTAAAAAGAGAAATCATTAATCACAGGTCTCTAAGACATCCTAACATTATCAGGTTTAAGGAGGCTCGTTTCTTCTTTCAACAGCTCATATCTGGAGTCAGCTATTGTCATGCAATGGAAGTGTGTCACCGGGACCTGAAGTTGGAAAACACTTTGTTGGATGGAAGCCCAGCACTTCATTTGAAGATATGTGATTTTGGATACTCCAAGTCTTCAGTTCTTCATTCACAACCTAAGTCAACTGTGGGAACTCCAGCATATATTGCTCCAGAAGTATTGCTAAAGCAAGAGTATGATGGCAAGATTGCAGATGTCTGGTCATGTGGAGTAACCTTGTATGTCATGCTAGTGGGATCATATCCTTTTGAAGATCCTAATGATCCAAAGGATTTCCGGAAGACAATTCAGAGGGTTCTCAGTGTCCAGTACTCCATTCCAGACTTTGTTCAAGTATCTCCTGAGTGTCGCCACCTTATCTCAAGGATCTTTGTTTTCGACCCTGCAGAGAGAATCAGTATTCCTGAAATATTGAAAAACGAATGGTTTCTGAAGAATCTCCCTCCTTACTTGATGGATGAAAAGATTATGGGTAACCAATTTGTGGAGTCAGATCAACCGATGCAGAGCATTGATACGATCATGCAGATAATTTCAGAAGCTACCATACCAGCTGCGGGGACCTATTCTTTAGACCAGTTTATGGCTGATAACATGATAGATGATGACATGGATGAATTAGACTCTGACTTTGAGCTTGATGTAGATAGCAGTGGGGAGATAGTGTATGCCATATAA 978 0.4315 MDRPSTGAGVDMPIMHDSDRYDFVRDIGSGNFGVARLMRDKQTQELVAVKYIERGDKIDENVKREIINHRSLRHPNIIRFKEARFFFQQLISGVSYCHAMEVCHRDLKLENTLLDGSPALHLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKQEYDGKIADVWSCGVTLYVMLVGSYPFEDPNDPKDFRKTIQRVLSVQYSIPDFVQVSPECRHLISRIFVFDPAERISIPEILKNEWFLKNLPPYLMDEKIMGNQFVESDQPMQSIDTIMQIISEATIPAAGTYSLDQFMADNMIDDDMDELDSDFELDVDSSGEIVYAI 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1382 325 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 13 82 - -
Aed11g1382 325 SMART serkin_6 21 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1382 325 Gene3D Transferase(Phosphotransferase) domain 1 85 301 - -
Aed11g1382 325 ProSitePatterns Serine/Threonine protein kinases active-site signature. 102 114 IPR008271 GO:0004672|GO:0006468
Aed11g1382 325 ProSiteProfiles Protein kinase domain profile. 21 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1382 325 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 82 319 - -
Aed11g1382 325 PANTHER SERINE/THREONINE KINASE 13 82 - -
Aed11g1382 325 SUPERFAMILY Protein kinase-like (PK-like) 14 284 IPR011009 -
Aed11g1382 325 PANTHER SERINE/THREONINE KINASE 82 319 - -
Aed11g1382 325 Pfam Protein kinase domain 81 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1382 325 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Aed11g1382 325 Gene3D Phosphorylase Kinase; domain 1 1 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1382 Aed-Chr11 18469273 18475170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1382 20 247 CBL-interacting serine-threonine protein kinases AT5G25110 39.194 5.09e-52 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Aed11g1382 Pkinase 4.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1382 K14498 - gmx:100788440 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0860 6 8557944 8563596 Aed11g1382 11 18469273 18475170 PCT