Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1373 ATGTCATTTTCGTTGTTCGCCACGCCGCAGCAACAGCAACCGCAACCGCAGCAGTCTCCTTTTCAGCCACAGCAAAGTAGTTTGTTCCTTCCGCAGCAGCAGCAACAATTTCAGCCACAACAGCAACAACAGCAGCAGCAGCAGCAGCAGCCGCAACAGCAGTTGTTTTTGTTCACTAACGATAGAACTCCCGCTAGTTATAGTACCAATTGGGCGGATCTACATCCTGATTCCCAGAAGATTCTTCTTCAGATCGAGGAGCGGATATTGGAGTATAGGGATGAAAGCCAGAGACTAGATCAGTGTAGTCGTCTTTATGATTCTTCGGTTTCCAACGATGGATTTGAGCTTGATGCAGGCCATATTATTCAGGAACTTGGTGGAATTAACACTGCTATGGAACGACAGAAAACTTTGCTACAGGAACTGATGTCCACTGTTAAGGATATGTTACGCAACACAGAGGTTGCTGTTCGTTCCTTTATGATGCTACGCCCTAGATTCCTTCATCCCAGTGCTGGTACATCAAGTGCCACTGCCCCATCACAGACTCCTGGAGCATCTATAGCACCTAATTCTAGTAGCCAACCAACAACTGCATCTATAGTGCCTGTTTTTGATTTCTACAGTGGTCTTCCAAGGAAACCATCTCCATTTTTACAGCAAACAGTTTTAAGATTTGAAAAGTATCTTGGTGAGTGCCATCAATGGATTGAAGAGTTGGAGCAGCTGCTTCTCTTGGATTCTGAGAGAAATGCTTCCAGTAATGGATCCTCATTATTGCAATCTCTTCCCAAGGTCATGACAAATGTGCACGACTTTTTTGTTCATGTGGCTGCAAAGGTGGAGAGCATTCATCAGTACATTGAATCTATGAAATCAGCATACCTAGCTGATCAGTGTCGGCGGGGGGAGGTGAATGATCCATTTTTGGAGGCAGATCGGCGAGAAACTGCACGACAAGAAGCTGCCTCAAAAAGAGTTCATCCAACATTGCATTTACCTGCAAATTCACAACCCTCAACTCAAGTTGCTGGTTTGTTTTCCAGTTCAGGGACTCAAGCAGCATTGCCTGCCCCACAGACATCTGCAGCAACTTCATCTTTGTCATCAGGAAGTGGATTCTCTCTTTTTAACACACCATCTTCTGCTCCATCGTCTTCTATGTTGTCATCTCTGTTTACAACACCAACTCCTGCTCCAGGACCTCAAACCTCACTTTTTGGTTCTACAACATCTGTACCTGGTCCTGCATCAACTCCCTCTCTGTTTGGTAATACTACTCCATTTAGTATGACTCCAGCTACAAATTCACTCTTTTCAACTCCATTTGTTTCAGGTGCTGCTACAACAGGATCTGGGGCTAGCTTTGGACCTGGATCGAAAAATCCACGGGCGAAATCTAGAACTGCTCGACGCTAA 1422 0.4522 MSFSLFATPQQQQPQPQQSPFQPQQSSLFLPQQQQQFQPQQQQQQQQQQQPQQQLFLFTNDRTPASYSTNWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLYDSSVSNDGFELDAGHIIQELGGINTAMERQKTLLQELMSTVKDMLRNTEVAVRSFMMLRPRFLHPSAGTSSATAPSQTPGASIAPNSSSQPTTASIVPVFDFYSGLPRKPSPFLQQTVLRFEKYLGECHQWIEELEQLLLLDSERNASSNGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQYIESMKSAYLADQCRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANSQPSTQVAGLFSSSGTQAALPAPQTSAATSSLSSGSGFSLFNTPSSAPSSSMLSSLFTTPTPAPGPQTSLFGSTTSVPGPASTPSLFGNTTPFSMTPATNSLFSTPFVSGAATTGSGASFGPGSKNPRAKSRTARR 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1373 473 Gene3D - 215 305 - -
Aed11g1373 473 MobiDBLite consensus disorder prediction 332 346 - -
Aed11g1373 473 MobiDBLite consensus disorder prediction 1 52 - -
Aed11g1373 473 MobiDBLite consensus disorder prediction 315 346 - -
Aed11g1373 473 PANTHER NUCLEOPORIN P58/P45 5 469 - -
Aed11g1373 473 MobiDBLite consensus disorder prediction 172 197 - -
Aed11g1373 473 MobiDBLite consensus disorder prediction 386 436 - -
Aed11g1373 473 MobiDBLite consensus disorder prediction 450 473 - -
Aed11g1373 473 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 5 469 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Aed11g1373 473 Coils Coil 133 153 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1373 24 473 NAC Transcription Factor Family AT4G37130 58.580 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1373 K14307 - gmx:100776992 726.087