Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1350 ATGTCTGAGAGCTTTACATCCTTTCATATCAACACCGTCACATTCAACAACTACACTAGTACACCACACCATTGGTTTTCTCTTGGATCTTGTATTAATTCCTGCAATTCTATGTCCCAAGATTTTCAACAAGGAATCTTCAGCTTCCCGAATGGGTTGGAGAGAGGAAGGGTAGTGAGTCCGCAGCAGCAGATCCGGAGGGACAAGGTGAGGCTGCAAGGAGGGTTCGAGGCGGCAGCGCCATTGGTAGGGATAGAGGAAGAGGAGCCGGTGTACGAGACCGCCGGGATGTTGTCGGAGATGTTCAATTTACCGCCTGCCACGGAGTTGTTGGAGCAGCAGCACCAGCAGGTGACGGCGACGTTCCGGGCGGCGAGGCAAGCCGGAGAGTGGTACGGAAACAGACAACAACAAGGGGTGAATATGATGATAAGTGGGTTGGGTGATTCCAAGAACAACCAGCACCAGCACCAGATTTCAGGCATTAATGCTGACTCAGCAGCAGCCATGCAGCTTTTTCTGATGAACCCTCAAACAAGGTCGCCTTCTCCTCCTCAAAGCCACGCTACTCCTTCCTCAACTCTTCACATGTTGCTTCCGAATCCTTCTTCCAATTCCCTCCAAGGATTCACTGGGTCGGCCGCGGGAGGGTCTTTTGGTCAATACACATGGGTTCCTGAGAGTGCTCATCAACAAGGAGGCGTGGTGGAAGGGCAAGGTCTTTCGTTGTCGCTGTCTTCTTCGCTGGAAGCAGCCAAAGCCGAGGAATTGAGGATGGGGGATAGTGGTTTTCTATATTACAATCATCAACAACAAGGTGGTGGTGGTGGTGGTCCTTCTTCTTCCGCTGCTCAGTTTCCCTACCAGAATAATAATAATAATCATAATCATCAGCAGGCATTGCATTTGCAAGGGGCGATGGGACACGACAACAACCACCAGGGACATGTTGGGTTCGGGTCATCCTCGTTAGGTGTAGTTAATGTTATGAGAAATTCAAAGTATGTGAAGGCTGCACAAGAGTTGCTGGAAGAGTTTTGCAGTGTTGGGAGGGGTCAGTTTAAGAAGAGCAAGTTCAATAGGCAGAATTCAAACCCTAATTCAAATCCCGGTGGTGGTGGTGGTGGTGGTTCTTCGCCTTCATCAAAAGATGCTCCTCCTCCTCCTCCTCCTTTGTCAGCGGCTGATAGAATTGAGCATCAGAGAAGGAAGGTGGACAGGAGATACAACCACTACTGCGAGCAAATGCAAATGGTGGTGAACTCATTTGACCTGATGATGGGTTATGGGGCGGCAGTGCCATACACGGCACTGGCGCAGAAAGCAATGTCACGGCATTTCCGGTGCCTGAAGGAGGCGATAACAGCGCAGCTGAAACAAAGTTGTGAGGTACTAGGAGAGAAAGATGGGGCTGGGACCTCAGGTTTGACCAAGGGTGAGACTCCAAGGCTTAAGATGCTTGAACATAGCCTAAGACAGCAGAGAGCTTTCCACCAGATGGGTATGATGGAACAAGAAGCTTGGAGACCCCAGAGAGGCTTGCCTGAACGTTCTGTCAACATTTTGAGAGCCTGGCTCTTCGAGCATTTCCTCCACCCGTATCCAAGCGATGCAGATAAGCATCTGTTGGCACGACAGACTGGCCTATCGCGAAATCAGGTATCAAACTGGTTCATTAATGCCAGGGTTCGGTTGTGGAAACCCATGGTGGAAGAGATGTACCAACAAGAACTTAAAGAAGCAGAGAGTGCAGATGAGAGAGAAATGAGCCAAAGCAACAACAACAGCAACATTAGTGGGAACCAAGCACAAACTCCAACCACACCAGCAGCAGCAGCGGCTACAACATCAACAGCAACAGCGCCACCACCACCAACAACAAAACCGACAGGCAAAAGACCCGAAGCCATCAATGCCCCCGAAAGCGACCCTTCACAGCTCGCTGTCGCTGCAATGAATAATAATAGACAGGGCTTCTCGGAAAACCAAGCAAAGCAGTCCACCACTCTCATGGCCTCCGTCAGCGCCACCGCCTCTGAGGTGGCGCCACCCGTGCCTCAGTGCTTCGACTCAGACCTGCCCCCACACAGATTAATGGTCTCAGATGACACGTGTCGCTTGGTCACAGCAGATTTTGGGACCGCATCTGCAAGTGCTGACATTGGATCCACTCTCATTAGGTTTGGGACCACACCCGGTGACGTGTCACTCACCTTAGGGCTTCGCCACGCCGGGAACATGCCCGAGAAAACTCCTTTCTCTGTTAGAGACTTTGGAGCCATTTAA 2286 0.5092 MSESFTSFHINTVTFNNYTSTPHHWFSLGSCINSCNSMSQDFQQGIFSFPNGLERGRVVSPQQQIRRDKVRLQGGFEAAAPLVGIEEEEPVYETAGMLSEMFNLPPATELLEQQHQQVTATFRAARQAGEWYGNRQQQGVNMMISGLGDSKNNQHQHQISGINADSAAAMQLFLMNPQTRSPSPPQSHATPSSTLHMLLPNPSSNSLQGFTGSAAGGSFGQYTWVPESAHQQGGVVEGQGLSLSLSSSLEAAKAEELRMGDSGFLYYNHQQQGGGGGGPSSSAAQFPYQNNNNNHNHQQALHLQGAMGHDNNHQGHVGFGSSSLGVVNVMRNSKYVKAAQELLEEFCSVGRGQFKKSKFNRQNSNPNSNPGGGGGGGSSPSSKDAPPPPPPLSAADRIEHQRRKVDRRYNHYCEQMQMVVNSFDLMMGYGAAVPYTALAQKAMSRHFRCLKEAITAQLKQSCEVLGEKDGAGTSGLTKGETPRLKMLEHSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQQELKEAESADEREMSQSNNNSNISGNQAQTPTTPAAAAATTSTATAPPPPTTKPTGKRPEAINAPESDPSQLAVAAMNNNRQGFSENQAKQSTTLMASVSATASEVAPPVPQCFDSDLPPHRLMVSDDTCRLVTADFGTASASADIGSTLIRFGTTPGDVSLTLGLRHAGNMPEKTPFSVRDFGAI 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1350 761 MobiDBLite consensus disorder prediction 357 400 - -
Aed11g1350 761 Gene3D - 511 573 - -
Aed11g1350 761 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 85 750 - -
Aed11g1350 761 SUPERFAMILY Homeodomain-like 510 575 IPR009057 -
Aed11g1350 761 SMART HOX_1 508 572 IPR001356 GO:0003677
Aed11g1350 761 MobiDBLite consensus disorder prediction 578 642 - -
Aed11g1350 761 MobiDBLite consensus disorder prediction 268 295 - -
Aed11g1350 761 MobiDBLite consensus disorder prediction 588 621 - -
Aed11g1350 761 Pfam Associated with HOX 329 455 IPR006563 -
Aed11g1350 761 SMART prehox3 324 456 IPR006563 -
Aed11g1350 761 CDD homeodomain 508 569 IPR001356 GO:0003677
Aed11g1350 761 Pfam Homeobox KN domain 525 564 IPR008422 GO:0003677|GO:0006355
Aed11g1350 761 ProSiteProfiles 'Homeobox' domain profile. 505 568 IPR001356 GO:0003677
Aed11g1350 761 MobiDBLite consensus disorder prediction 357 376 - -
Aed11g1350 761 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 2 85 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1350 Aed-Chr11 18286505 18293486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1350 36 555 Homeobox Transcription Factor Family AT4G36870 51.042 1.59e-135 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Aed11g1350 POX 4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1350 - - gmx:100777243 1073.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1350 11 18286505 18293486 Aed11g1350 11 18286505 18293486 ECH
Aed11g1350 11 18286505 18293486 Aed7g0968 7 7372591 7379760 PCT