Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1343 ATGCATTTCTTTCCCTTCATCATTTTCACACTATTGATCCACAACTTCTCTCTGATTCTGGGGCAGCAACCTTATATTGGTTTAGGCACAGTAGCGTGCCCAAGAAGGGGTAACAAAAATTCAATCCGTGGTTACACTTGTAATGGTGCAAACCATAGCTGCCAAAGTTACCTCACCTTCAGATCTCAACCCATTTACAACTCTGTTAAGTCAATATCAACTTTGTTGGGTTCTGACCCATCCCAGCTTGCTAAAATAAACTCCGTTTCCATGAATGGTACCTTTGAAACAAACAAGTTGGTCATTGTTCCGGTCAACTGTTCCTGCGCAGGTGAGTATTATCAGACAAACACATCCTATGTGTTCCATAATGCAGAAACTTACTTCTTGATAGCCAACAACACTTTTGAGGGCCTCACAACATGTCAAGCTTTGGAGCATGAAAACCACAACCCTGCAAATATATACCCCGGTAGAACACTTTTAGTGCCTCTTAGATGTGCTTGTCCCACAAAGAACCAAACTGAGAAAGGCATCAGGTACCTCTTAAGTTACTTGGTCAACTGGGGTGATTCTGTTTCATTCATTAGTCACAAATTTGGTGTCAGCACTAACACTACTCTTGAAGCTAATACCCTTACTCTCACACAAGCCTCGATCTATCCTTTTACCACACTTCTAGTTCCGCTTCATGATAAGCCCTCAAGTTCTCAAACCGTTTTTCTTTCGCCAACTCAACGCACTCCACCACCGTCACCTCCTCCCTCTTCTCATCATATCTCAAACAAAACATGGGTGTATATAGTTGTTGGAGTTGTTGCAGGAGCTATTGCCTTAACATCAGTTCTCTGTGCTGTCATTTTCTTCACACGCTATCGCAAAAATATAAACAAAGATGACTCCGTGGTAGTAGTTTCTAAGGGTTTTGAGGCAACTGAGGAAAAACAACAAGTGAAAGTGAATGAAAAATTGTCAGAGATCATATCTGGCATAGCTCAGTCTTTCAAAGTGTATGGTTTTGAGGAACTGCAGCGTGCAACAGATAACTTTAGTCCTAGCAGCTGGATCAAAGGGTCTGTTTATCGCGGTGTGATCAATGGTGATTTGGCTGCAATTAAAAAGATAGAAGGAGATGTGTCAAAGGAGATAGAGATACTGAGCAAAATCAACCATTCCAATGTTATACGCCTTTCTGGGGTTGGCTTCCACGAGGGGCGTTGGTACCTTGTTTATGAGTATGCTACTAATGAGGCCTTGAGTGAATGGATCTACTTCAACAACGTGGATGGCAAGTTTCTGAGTTGGACGCAGAGAATGCAGATTGCATTGGATGTGGCCACAGGACTTGACTATCTCCACAGTTTCACTTCTCCTCATATCCACAAAGATATTAATAGCAGTAATATTCTTCTGGATGGTGATTTCAGGGGAAAAGTCGCGAACTTGAGCCTTGCTAGGTGTTTGGAAGGAGGAGATGATCAATTTCCCGCGACAAGGCACATTGTTGGGACAAGAGGCTACATGGCTCCAGAGTATTTGGAAAATGGTCTTGTCTCTACAAAGCTTGATGTGTATGCTTTTGGGGTACTGATGCTGGAAATGGTCACGGGAAAAGAGGTTGCTGCTATTTTATCTGAAGATGAGACAAACTTGTCTCATGTTTTAAGTGGCATGCTTGGTGAGGAAAGTGGCCATGAGAGGTTGAAGGAGTTTGTGGATCCCTCTTTGGGAGAAAATTGTCCATTGGAACTTGCTATGTTTGTGATTGAAGTTATTGATAATTGCATAAAGATTGATCCGGCAAGTCGCCCTAGTGTGCATGAGATTGTGCAATCTCTGTCAAGAACCCTGAACTCTTCACTGAGTTGGGAAAGTTCAATGAATGTCCCAAGAAATTAA 1899 0.4239 MHFFPFIIFTLLIHNFSLILGQQPYIGLGTVACPRRGNKNSIRGYTCNGANHSCQSYLTFRSQPIYNSVKSISTLLGSDPSQLAKINSVSMNGTFETNKLVIVPVNCSCAGEYYQTNTSYVFHNAETYFLIANNTFEGLTTCQALEHENHNPANIYPGRTLLVPLRCACPTKNQTEKGIRYLLSYLVNWGDSVSFISHKFGVSTNTTLEANTLTLTQASIYPFTTLLVPLHDKPSSSQTVFLSPTQRTPPPSPPPSSHHISNKTWVYIVVGVVAGAIALTSVLCAVIFFTRYRKNINKDDSVVVVSKGFEATEEKQQVKVNEKLSEIISGIAQSFKVYGFEELQRATDNFSPSSWIKGSVYRGVINGDLAAIKKIEGDVSKEIEILSKINHSNVIRLSGVGFHEGRWYLVYEYATNEALSEWIYFNNVDGKFLSWTQRMQIALDVATGLDYLHSFTSPHIHKDINSSNILLDGDFRGKVANLSLARCLEGGDDQFPATRHIVGTRGYMAPEYLENGLVSTKLDVYAFGVLMLEMVTGKEVAAILSEDETNLSHVLSGMLGEESGHERLKEFVDPSLGENCPLELAMFVIEVIDNCIKIDPASRPSVHEIVQSLSRTLNSSLSWESSMNVPRN 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1343 632 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 6 628 - -
Aed11g1343 632 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 4 6 628 - -
Aed11g1343 632 Gene3D Transferase(Phosphotransferase) domain 1 415 628 - -
Aed11g1343 632 SUPERFAMILY Protein kinase-like (PK-like) 332 618 IPR011009 -
Aed11g1343 632 Pfam LysM domain 185 229 IPR018392 -
Aed11g1343 632 Gene3D LysM domain 170 240 IPR036779 -
Aed11g1343 632 Pfam Protein kinase domain 359 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1343 632 ProSiteProfiles LysM domain profile. 183 228 IPR018392 -
Aed11g1343 632 Gene3D Phosphorylase Kinase; domain 1 317 413 - -
Aed11g1343 632 ProSiteProfiles Protein kinase domain profile. 346 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1343 632 MobiDBLite consensus disorder prediction 237 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1343 Aed-Chr11 18222848 18224746 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1343 1 626 Receptor kinase-like Gene Family AT2G23770 43.060 1.62e-165 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aed11g1343 Pkinase 2.9e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1343 - - gmx:100815842 1116.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1343 11 18222848 18224746 Aed11g1343 11 18222848 18224746 ECH