Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1327 ATGGGTACTGGTGAAGAAACCACAGCTAAAGTTTCTAAACCATCTTCTACTTCTTCAACTCAGATACCACTAGCACCTTCATATCCTGATTGGTCAAGCTCAATGCAGGCTTACTATGCTCCTGGAGCCACTCCACCTGCATTTTTTGCCTCAAGTGTTGCTTCCCCAACTCCCCATCCCTATATGTGGGGAAGCCAGCATCCTCTAATTCCACCATATGGTACTCCTGTTCCATATCCAGCTATATATCCTCCCGGGAATGTCTATGCTCATCCTAGCATGGCAACGACCCAGTGCACCACAGAGTTTGTAGGAAATGGGGCTGATGGAAAAGATCGGGTTTCTGCCAAAAGTTCGAAGGTTATGTCTGCAAACCCTGGTTCCAAGGCAGGAGACAATGGAAGGGCAGGCTCAGGTTCCGGAAATGATGGCGTCTCACAAAGTGCTGAAAGTGGTTCAGAGGGATCTTCAGATGCTAGTGATGAGAATACTAACCAACAGGAATCAGCTACAAACAAGAAAGGGAGATTTGACCAAATGCTTGTTGATGGAGCCAATGCACGGAACAATTCTGTCATCGCCATTCCTGAAGCTTCAGTACCTGGAAAGCCGGTTGTGCCAATGTCTGGAACGAGTCTTAATATTGGAATGGAGTTGTGGAATGCATCTCTTGCTGGTGCCGAAGCTGCAGCAACGAGACAACACAATCAATCTGCTGCCCCTGGAGCTGTTACTCCTCCAACCATAATGGGACGTGAAGTTGTACTTGGTGAACAGTGGATACAAGACGAACGTGAACTAAAGAAACAGAAGAGGAAACAGTCTAATAGAGAGTCAGCTAGGAGGTCAAGACTACGCAAGCAGGCTGAGTGTGGAGAGTTACAAAAGAGGGTGGAGTCTCTGGGAAGTGAGAATCGAACTCTCAGAGAAGAGCTTCAGAGAGTATCTGAAGAATGCAAGAAACTTACATCTGAAAATGATTCCATCAAGGAAGAGTTAGAACAGCTGTGTGGAGCAGAAGCAGTTGCTAATCTTGAATAA 1041 0.464 MGTGEETTAKVSKPSSTSSTQIPLAPSYPDWSSSMQAYYAPGATPPAFFASSVASPTPHPYMWGSQHPLIPPYGTPVPYPAIYPPGNVYAHPSMATTQCTTEFVGNGADGKDRVSAKSSKVMSANPGSKAGDNGRAGSGSGNDGVSQSAESGSEGSSDASDENTNQQESATNKKGRFDQMLVDGANARNNSVIAIPEASVPGKPVVPMSGTSLNIGMELWNASLAGAEAAATRQHNQSAAPGAVTPPTIMGREVVLGEQWIQDERELKKQKRKQSNRESARRSRLRKQAECGELQKRVESLGSENRTLREELQRVSEECKKLTSENDSIKEELEQLCGAEAVANLE 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1327 346 PANTHER G-BOX-BINDING FACTOR 1 1 346 - -
Aed11g1327 346 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 271 286 IPR004827 GO:0003700|GO:0006355
Aed11g1327 346 MobiDBLite consensus disorder prediction 139 174 - -
Aed11g1327 346 Gene3D - 267 322 - -
Aed11g1327 346 CDD bZIP_plant_GBF1 269 319 IPR045314 GO:0003700|GO:0006355
Aed11g1327 346 MobiDBLite consensus disorder prediction 110 177 - -
Aed11g1327 346 Coils Coil 291 339 - -
Aed11g1327 346 SMART brlzneu 264 328 IPR004827 GO:0003700|GO:0006355
Aed11g1327 346 Pfam bZIP transcription factor 264 326 IPR004827 GO:0003700|GO:0006355
Aed11g1327 346 MobiDBLite consensus disorder prediction 1 26 - -
Aed11g1327 346 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 266 329 IPR004827 GO:0003700|GO:0006355
Aed11g1327 346 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 346 IPR044827 GO:0003700|GO:0006355|GO:0043565
Aed11g1327 346 Pfam G-box binding protein MFMR 1 94 IPR012900 -
Aed11g1327 346 SUPERFAMILY Leucine zipper domain 267 323 IPR046347 GO:0003700|GO:0006355
Aed11g1327 346 MobiDBLite consensus disorder prediction 266 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1327 Aed-Chr11 18107682 18114786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1327 1 346 bZIP Transcription Factor Family AT4G36730 52.738 1.52e-103 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed11g1327 MFMR 1.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1327 K09060 - gmx:100808533 570.852