Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1326 ATGAGAGTTCCCGTTCCTTCATCCCCACAGGCCAACCCAAAACCCACCAATAACGTAGTCCGTACCATTGCCCTTCCCAATCTCAGCAACAACAACAACAACAACACCACGGGCCTGTGCTACGAGCCCACTTCTGTCCTCGACCTGTGCCGGAGCCCCAGCCCGGGCACCGAAAAGCCCACCGATCACGCCCTTCTCCTGACCAACTCCCAAGACTGTCTCGACCTGGACGACCATGCGTTGCACAACTTGGATTGGGACTCCATCATGAACGACTTGGGCTTACACGACGACTCCGCCGCCCCTGTTTTGAAAACTTTTCTCCACCCCGACGACGATGACGACGACGACTTCACCTCCTTCGACCACGCGCTTGAATTCACCACTCTCTCCGACATCTACTCCAACCAAAACCTCGCTTTTGATTTCAACCACTTGCCACACGACATCAACCACCACCACCATCCCAACGGCTTCGATTTCATCGAAGAGCTCATCCGCGCCGCCGATTGCTTCGATACCAAGCAGTTACACGTGGCGCATGTGATATTGGAGCGGCTCAATCAACGGCTACGTTCTCCTGTGGGAAAACCACTCCAACGCGCAGCCTTCTACTTCAAAGAAGCTCTCCAGTGTCTTCTCTCCGGTTCGAACCGGACCCCGAGGATTTCTTCCCTGGTGGAAATCGTGCACAGTATCAGAACCTTCAAGGCCTTTTCGGGAATCTCACCCATCCCAATGTTCTCGATCTTCACCACCAATCAAATAGTTCTGGATCACGTTGCGTGCTCCTTCATGCACGTCATCGACTTCGACATCGGCCTCGGCATCCAATACGCTTCTCTCATGAAGGAGATTGCCGAGAAGAATACGCTTCTAGACTCGCCGCTGCTCCGAATCACCGCCGTCGTTCCGGAAGAATACGCCGTCGAGACCACGCTCGTCCGCGACAACCTCGCACAGTTCGCGCTCGAACTCAGGATCCGCGTCCAGGTTGACTTCGTGCCGCTTCGAACCTTCGAGAATCTCTCTTTCAAGGCCGTGAAGTTTGTCGATGGCGAGAACATCGCCGTTCTCTTGTCGCCGGCGATTTTTCGCCACCTCGGCAACGCCGCCGCGTTCATGGCGGACGTGCGGAGGGTCTCCCCGAGCGTGGTGGTTTTTGTGGACGGCGAGGGATGGGCGGAGATGGCCACGGCGTCCGCGGCGTCGTTCCGGCGAGGAGTTGTGAGCAGTTTGGAGTACTACTCGATGATGCTGGAGTCGCTGGATGCGTCGACGGTGGGAGGAGGAGGCGAGTGGGTGAGGAGAATCGAGATGATGCAGCTGCGGCCAAAGATTTTGGAAGCGGTGGAAAGCGCGTGGCGGCGGGTGCCGCCTTGGAGGGATGCGTTTTACGGCGCTGGAATGAGGCCGGTTCAGCTGAGCCAGTTCGCGGATTTTCAAGCGGAATGCTTGTTAGCGAAGTCACAAATCAGAGGCTTCCACGTGGCAAAACGTCAGAACGAACTGGTTGGGCTCCGTTTGCTCCTTTTACCTGTTGGTTCCAACGTTGTAATTCGAACAGCATGCTGTACTGTGGGAGTTGCTTTGCCTGTGTACTCTACGTTCAAGGCAATAGAAAGTAAAGATCAAAATGCTCAACATAGGTGTCTTCTCTACTGGGCAGCCTATGGTTCATTCAGCCTTGTTGAAGTGTTCACAGACAAGCTTATTTCTTGGTGTCCTATCTACTATCACCTGAAGTTTGCATTTCTTGTTTGGCTTCAACTTCCACCTACTAGTGGAGCAAAACACTTATATGCCAACCACTTGCGCCCCTTCTTGTTGAGGCATCAAGCACGAGTTGATCGAGTCTTGGGTTTTGCATATTGTGAAGTGATAAAACTTGTCAGTTCATACCAAGCAGAGATCCAGATTGTCAAGAGCATGGTAGTAAAGATAACTGGATCAGATCAAATGTTGAGAGGCCGCAATGCTGAATCAGATAGATCGCCGCAACATAGTTCAGCCGAAGACCCTGCTGACTCTGATGCTGAAACTGACCACACCCACAGCCCTTAA 2064 0.5339 MRVPVPSSPQANPKPTNNVVRTIALPNLSNNNNNNTTGLCYEPTSVLDLCRSPSPGTEKPTDHALLLTNSQDCLDLDDHALHNLDWDSIMNDLGLHDDSAAPVLKTFLHPDDDDDDDFTSFDHALEFTTLSDIYSNQNLAFDFNHLPHDINHHHHPNGFDFIEELIRAADCFDTKQLHVAHVILERLNQRLRSPVGKPLQRAAFYFKEALQCLLSGSNRTPRISSLVEIVHSIRTFKAFSGISPIPMFSIFTTNQIVLDHVACSFMHVIDFDIGLGIQYASLMKEIAEKNTLLDSPLLRITAVVPEEYAVETTLVRDNLAQFALELRIRVQVDFVPLRTFENLSFKAVKFVDGENIAVLLSPAIFRHLGNAAAFMADVRRVSPSVVVFVDGEGWAEMATASAASFRRGVVSSLEYYSMMLESLDASTVGGGGEWVRRIEMMQLRPKILEAVESAWRRVPPWRDAFYGAGMRPVQLSQFADFQAECLLAKSQIRGFHVAKRQNELVGLRLLLLPVGSNVVIRTACCTVGVALPVYSTFKAIESKDQNAQHRCLLYWAAYGSFSLVEVFTDKLISWCPIYYHLKFAFLVWLQLPPTSGAKHLYANHLRPFLLRHQARVDRVLGFAYCEVIKLVSSYQAEIQIVKSMVVKITGSDQMLRGRNAESDRSPQHSSAEDPADSDAETDHTHSP 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1326 687 Pfam TB2/DP1, HVA22 family 532 608 IPR004345 -
Aed11g1326 687 Pfam GRAS domain family 162 505 IPR005202 -
Aed11g1326 687 MobiDBLite consensus disorder prediction 657 687 - -
Aed11g1326 687 ProSiteProfiles GRAS family profile. 152 521 IPR005202 -
Aed11g1326 687 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 505 IPR005202 -
Aed11g1326 687 MobiDBLite consensus disorder prediction 656 687 - -
Aed11g1326 687 PANTHER SCARECROW-LIKE PROTEIN 15 6 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1326 Aed-Chr11 18101162 18107566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1326 74 505 GRAS Transcription Factor Family AT4G36710 54.167 3.54e-152 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed11g1326 GRAS 1.2e-70 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1326 - - gmx:100807470 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1326 11 18101162 18107566 Aed11g1326 11 18101162 18107566 ECH
Aed11g1326 11 18101162 18107566 Aed7g0985 7 7567805 7569430 PCT