Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1309 AAACAACAAGGAGAGGCATCAAAAGATGTTGTTAGAAGAACCCCCCTCAAGATCAAGATTAAACAATTAGAAGATCAAACCCTTCTCGAGAGAGGGCTATCAGTTAAAGAAAAAGTTCAAAGACATTGGAACCATCTCAAGTTTTTGTTTTCAACCGTCGAGTCAACAATATCTGAAAGGGAGTCTTTGCAATTTGAGGAAAATGTTAATATGCTTTCTTTAAGAATTGCTAACTCAATTTTCATGCTAAACAGAAATGAGAGAATGTCCGATGACCAAACAGTTATTGGAAAATACCAGATGTATTATGACAAAAATAGAGGTGAAATGGCGATATGCAGTGACAATGAGGAAGACAATGAAGAAGAGATAGTATATATTGAGGATGTCAAACATGAATTCACTGAGGCAGAAGACAAAATTTTGTGGATGATACTTGAGGAATATGGGTCTACTGAGGAGGTATTGAGTGTCGTTAAAAAGTCTTTTAACACTACTAGTTTACAAATTGAGCAAAGATATGAAAAACTCAAGGAAAAGGATATGGAGAGTCTAGACCAACATCGTGAGGATTGTCATTGTAGAGGATGTGAAAATCATCTTGGATTATGTTTGGAAAAAAACTTGAGTGCTACTGTAGAAGCTTTCGATAAACTCTTCTGTCGACGATGTCTGATCTTTGACTGTCCTATGCATGGCAATGATCAACCTTTAGTATATCATAGTGAAAACCAAGAAGTTTGGTCTAAACCTGAAAGTGATAAGAAGCCATGCAGTGACCAGTGTTACCTTATGTTAATGGATGCTAGGATTTCGTCAAAAAAATCAATTCAATTGTCTTTTCAAGATAAAAGAATTACAACAATGGAAGAGGACTCAACATTGCCTCCTGATGACGAAGAAAACCACACAATGTATTGTGAAACTTTGCAAAGTCTTGTGGAACATACTTCAAAAAAATTAAAGATTTCTGGTAGCTCTGGCGATGGACAGAAAGATCTCACAAGTGAGATAGAACTTAACCAAATGTACATTTCAAGGGATGTGCAAGTTAATGAGATGGCAAATGACTCAGATTGGAAACCTCTTGAAATAGATTTATATTTGAAGGGAGTAGAAATATTTGGAAAAAATAGTTGTCTTATAGCCATTACCTTACTTCCTGGCTTGAAGACTTGTTTGGAGGTAGCTAAGTACATGTTTTCTGGTGGAGAGTTAATGAACAATGGATCCATACCAAGTTCAATCACAAACACAAGTGAAAAGATCAATGCAGAGTGCACAGACAAAAAAACGCCATCAAGAACACGGTCGCAACAGAAAAAGGGCAAACCTAAGAAGTTTAATTGTTTTCGAAAGTCTGCTGGCCTCCCACCTAGATGGAGAAAAATTGCTTATGGACAAAACCTGGTTAATAAGCAATATACTCCTTGTGGGTGTCATGGAATATGTGGAAAAGAATGTCCTTGCTTTGTTCATGGAACTTGTGAAAAATATTGTGGGTGTTCAAAGATTTGTAGTAATCGATTTAGAGGATGTCATTGTACTAAAAGTCAATGCAAGAGTCGTTTATGCCCATGCTTTGCAGCCAACCGTGAATGTGATCCGGATGTTTGTCGAAATTGTTGGGTTAGGAAAAAATACAATTCTTTAATAATTTTGTCTATTATTCTTTTGGCAAAGTCGGATGTTATAGGATGGGGAGCTTTCATAAAGAACCCAATTAGCAAAAATGCTTGTCTAGGAGAATACACGGGTGAACTAATCACCCCTAAAGAAGCAGAAAAGCGTGGAAAATTATATGATCGTATAAATACTTCCTTCCTTTTTAACCTCAATAACCAGGCAAGTGTCTTGTATCAAATACATTTTCTCTTAAGCCTTATAGCTTTTCATATGGACTTTAGCATTCTTGTAATTTACATGAGGTGGGTTATTGATGCTTTTCGCCTAGGAGACAAGTTAAAATTTGCAAATCATTCATCAAAGCCCAACTGCTATGCAAAGGTGATGCTTGTTGGGGGAGATCATCGAGTTGGCATATTTGCGAAAGAAAACATTGAAGCTGGTGAAGAAATCTTTTATGATTACTGTTATGAACTAGATTGCGCACCGCGATGGGCTCTTCCATCTAAGGGGGGTCTTCCAAGAAAGATGAACTAG 2163 0.368 KQQGEASKDVVRRTPLKIKIKQLEDQTLLERGLSVKEKVQRHWNHLKFLFSTVESTISERESLQFEENVNMLSLRIANSIFMLNRNERMSDDQTVIGKYQMYYDKNRGEMAICSDNEEDNEEEIVYIEDVKHEFTEAEDKILWMILEEYGSTEEVLSVVKKSFNTTSLQIEQRYEKLKEKDMESLDQHREDCHCRGCENHLGLCLEKNLSATVEAFDKLFCRRCLIFDCPMHGNDQPLVYHSENQEVWSKPESDKKPCSDQCYLMLMDARISSKKSIQLSFQDKRITTMEEDSTLPPDDEENHTMYCETLQSLVEHTSKKLKISGSSGDGQKDLTSEIELNQMYISRDVQVNEMANDSDWKPLEIDLYLKGVEIFGKNSCLIAITLLPGLKTCLEVAKYMFSGGELMNNGSIPSSITNTSEKINAECTDKKTPSRTRSQQKKGKPKKFNCFRKSAGLPPRWRKIAYGQNLVNKQYTPCGCHGICGKECPCFVHGTCEKYCGCSKICSNRFRGCHCTKSQCKSRLCPCFAANRECDPDVCRNCWVRKKYNSLIILSIILLAKSDVIGWGAFIKNPISKNACLGEYTGELITPKEAEKRGKLYDRINTSFLFNLNNQASVLYQIHFLLSLIAFHMDFSILVIYMRWVIDAFRLGDKLKFANHSSKPNCYAKVMLVGGDHRVGIFAKENIEAGEEIFYDYCYELDCAPRWALPSKGGLPRKMN 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1309 720 ProSiteProfiles CXC domain profile. 461 559 IPR026489 -
Aed11g1309 720 CDD SET_EZH 560 699 - -
Aed11g1309 720 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 641 708 - -
Aed11g1309 720 MobiDBLite consensus disorder prediction 427 446 - -
Aed11g1309 720 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 5 80 IPR045318 GO:0006338|GO:0018024
Aed11g1309 720 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 82 616 IPR045318 GO:0006338|GO:0018024
Aed11g1309 720 Pfam CXC domain 512 543 IPR041355 -
Aed11g1309 720 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 5 80 - -
Aed11g1309 720 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 82 616 - -
Aed11g1309 720 SMART CXC_2 508 545 IPR033467 -
Aed11g1309 720 ProSiteProfiles SET domain profile. 549 698 IPR001214 GO:0005515
Aed11g1309 720 SUPERFAMILY SET domain 472 701 IPR046341 -
Aed11g1309 720 SMART set_7 557 704 IPR001214 GO:0005515
Aed11g1309 720 Pfam SET domain 566 697 IPR001214 GO:0005515
Aed11g1309 720 Gene3D SET domain 475 699 IPR046341 -
Aed11g1309 720 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 641 708 IPR045318 GO:0006338|GO:0018024
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1309 Aed-Chr11 18010587 18018214 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1309 496 697 C2H2 Transcription Factor Family AT2G23740 24.757 2.73e-08 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aed11g1309 SET 2.7e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1309 - K11430 gmx:100788459 1023.08