Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1291 ATGGAAATGAGTGGCCAAGATAAGGAAATAGAGACACCAACTACTTTAGTTTACAACCTAATTCCCAACCGAGATTTTTCTTCTTCCTCTTCCAAGCTCTCTTCTCCAACTGTTGGTGAAAGAAGTAGTAGTGATCATCATGATCAACCACCTCATCAAACTCGCACATTTATCCTCAACGAACCACCTCACCATAATCTCTATCCACCACCACCACCACCGCCACCGCCGCCGCCGCCTCCTCCCCTTGCACGGCGGCAACCCACATCAGATCCAGATCTAAGCAGCACCCGAATTGCTCCCACATCGAACCGCTACTACCCCAATAACAAGCACAACGGTCACCTTCACTACCCTACTACACCATCTTCTTCATCCCTTCATCATAGATTGGTTTCCACTACGGCTACACCTGCAAGCTTGGTCCCCCCAGTGATGATGGGGTTTGGAGGGCCAGCTGAGTCATCAAGTGAAGATCTGAACAACATGTTGTCAGTGCAGGCACCATCATCACTTTGTTCCAATAAGAATAAGAAGAGGTTCAGGACTAAGTTCTCTCAGCACCAGAAGGATAGGATGATGGAGTTTGCTGACAAGATTGATTGGAAGATCCACAAACACAATGACCAGGAGGTACACCACTTTTGTTCTCAACTTGGTCTCAAGAGACAGGTTTTTAAGGTTTGGATGCACAATAACAAGCAAACAAGCACTAATAAGAAGCACCACTAA 732 0.4658 MEMSGQDKEIETPTTLVYNLIPNRDFSSSSSKLSSPTVGERSSSDHHDQPPHQTRTFILNEPPHHNLYPPPPPPPPPPPPPPLARRQPTSDPDLSSTRIAPTSNRYYPNNKHNGHLHYPTTPSSSSLHHRLVSTTATPASLVPPVMMGFGGPAESSSEDLNNMLSVQAPSSLCSNKNKKRFRTKFSQHQKDRMMEFADKIDWKIHKHNDQEVHHFCSQLGLKRQVFKVWMHNNKQTSTNKKHH 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1291 243 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 120 238 - -
Aed11g1291 243 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 7 120 238 - -
Aed11g1291 243 Gene3D - 166 240 - -
Aed11g1291 243 MobiDBLite consensus disorder prediction 21 40 - -
Aed11g1291 243 MobiDBLite consensus disorder prediction 89 129 - -
Aed11g1291 243 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 178 235 IPR006455 -
Aed11g1291 243 SUPERFAMILY Formin homology 2 domain (FH2 domain) 72 80 - -
Aed11g1291 243 SUPERFAMILY Homeodomain-like 169 236 IPR009057 -
Aed11g1291 243 MobiDBLite consensus disorder prediction 64 87 - -
Aed11g1291 243 MobiDBLite consensus disorder prediction 21 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1291 Aed-Chr11 17900376 17901377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1291 142 240 ZF-HD Transcription Factor Family AT2G18350 51.887 1.94e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1291 - - gmx:100799830 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1291 11 17900376 17901377 Aed11g1291 11 17900376 17901377 ECH
Aed11g1291 11 17900376 17901377 Aed7g1012 7 7774565 7775530 PCT