Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1288 ATGGCATCATCTTGGACTCAAAGGCAAAACAAACTATTTGAAGAGGCCCTTGCTATATATGATAGGGAAACCCCTGACAAGTGGCAGAATGTGGCAAGAGTAGTGGGAAAATCCGTAGAGGATGTTAAAAGGCACTATGAAATCCTTAAAGAAGATATCAAGCTCATTGAGCGTGGACAAATCCCATTACCTAAGTACACAGAATCGTACGTGAACTTTGGCTGTCCAGGTGGTTTAGTTCTTGATGATGAAGAAATCAGAATGAATCAAAGATTAGCAAACTCAATAGCGTGA 294 0.4048 MASSWTQRQNKLFEEALAIYDRETPDKWQNVARVVGKSVEDVKRHYEILKEDIKLIERGQIPLPKYTESYVNFGCPGGLVLDDEEIRMNQRLANSIA 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1288 97 SMART sant 1 52 IPR001005 -
Aed11g1288 97 SUPERFAMILY Homeodomain-like 3 57 IPR009057 -
Aed11g1288 97 CDD SANT 4 50 IPR001005 -
Aed11g1288 97 ProSiteProfiles SANT domain profile. 1 54 IPR017884 -
Aed11g1288 97 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 67 IPR044636 GO:0003700
Aed11g1288 97 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 67 - -
Aed11g1288 97 Gene3D - 2 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1288 Aed-Chr11 17888823 17889729 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1288 - - pvu:PHAVU_003G254400g 124.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1288 11 17888823 17889729 Aed7g1014 7 7796642 7797378 PCT