Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1271 ATGGAACAGTCACCACCTTATCATAACCGATTTCCTCAGACTCCAAACTTAACCAAGAAAGGAAGAAGTGGTTATGATCCATCAGACACAGAGACAGAGTGGCAAGAGATTCCACGGCACGAACGAGAAAGAAGAAACTTCATCACTTTAGAAGAAGCAAAAGCACTTACTCTGGTGAGCAAAACCCCCATAGCACTACAAAGGAGGCACCCTTCAAGGTTTGAAAACGAAGTCTTATCAGTTTCAACAGCTTCAGCTCCAAGAAGAAGACCCCATAGCAAATCACCCTATAAGCTGCGCGTAGCAGAAGAAGATGCTGCTGCTACAAGGAGAAATATCAGTCCCTTGGCGAGACCTGACATTGGAAGAACCGTGTCTCCTTTCAGGGAGCAAAGAACTGAGAAGCAACACTACAAGAGATCAGTGACTGCTCCGAGATTGAGGATTCAAGAGAGCAACCTTGGAGGGAGAACAAATGACATGGCTCCTAAACAAAGAGAACCTTCAGTTGGAGAAATCAACGAGATGATAGCACAGGTGAAGCTATCTAAAGATCCCCCTAGTGATTACTCATCAGTGCTTGAAAGCACTGATTCTATTCATCCGGGTGACCTTTTCTTTTCTCGTGAATGCAATGCCATTCAAGGAAAGAATAATGATAATAATTCTTCGTTGCCAAGACGCATCCAACAACGCGAGTATTTCAGTCCAAGGCCATCGGTGAACACGGTGAGAATAATCCCACCTGAAAGCAAAGGAAGCAATGGTAACATTAACATCAATATGAATAACTTGTCTCGATCAAACAACACCGGTTTAAGTTCTGCTGCTGCGAGTAGAAAGGGCAGTGGCACTGGGAAGCCGAGTAGTGTAACAAGCGAAGGTAGTGGAAAGACAACTGCAAGCATGAAGAAATTCACAGCCAACAGAAAAAAGAACCTGCAGAAAGATACATGGTTTGCTTGCATGAGAACAGGTAACTGTAGAATCGCGAGAAAATCGCCTGAACGTCGACCAATTGACGAATCTTCTTTCATTGAGAGGGCTGTGGTGGTGTCTCCGGGCTCTTGTCCTCATATTTTGCTTCAAGGACCCTCTGGCTCCGGGAAAAGAGAACTAGCAATGGCTCTTCTTCGAGAAATATATGGTGATGCATGTTGCAATATCCTTTTGCAGCTGTCTCATGATTTAAGACAATTCCCTATTCAGGACCAAAGGCTTAAGAAAGTATCTGTTCCAATAACATCCAGTTCTCATCACATGGAGCTCGATGTGAATTCAGAACCAAATGCTAAATATGCTTTAATGGGATTAATCAAAGAAATTAGCAATGTATATGCAATTGCCCCCGAAGTCAGCAATATTAATTTCAAGTCAGATTTTAAAGTTATAATTCTTCATGACGTCCACAAAGCAGTAGATAACATCCAGCACATTATCAAATGGATCATAGACCGCTATTCTGATATATGCAAATTGGTACTCTGCTGTGAAGATGATGCAGACATTATTGAACCTGTGAAAAACCGGTTCAAAATTATCCAAGTTGATGCTCCACAAAATCACGAAATTACTGAGGTTCTTATTCAGATAGCAAAGAATGAGGAAATTGATCTATCCATGAATTTTGCTGCAAAAATAGCTACAAAATCTACGCAGAACCTCAGAAAAGCAATCATGGCTCTTGAAGCATGCAAAGCACACAACTTACTCTCAATACGAGGGAAATTTCAAATGCTTCTCTTGGATTTTGTCCACCCAAAGTTGATTCTCCAGAAACTGGTAGAACATCTCCTAAAAAGAATTGAGGCCAGCTTAAAAAGGGAGCTTTACTACTGGCATGCTTATTATGACAGAAGACTCCCACCAGGAATAACAGCTTTACTAAAGTTAGAAGAATTCGTGGCAAAGTTCATGAGTATGTGCAGAAAAAACTCTGGCAGTCGGCAATATGTGAAGGGTAATTGA 1968 0.4162 MEQSPPYHNRFPQTPNLTKKGRSGYDPSDTETEWQEIPRHERERRNFITLEEAKALTLVSKTPIALQRRHPSRFENEVLSVSTASAPRRRPHSKSPYKLRVAEEDAAATRRNISPLARPDIGRTVSPFREQRTEKQHYKRSVTAPRLRIQESNLGGRTNDMAPKQREPSVGEINEMIAQVKLSKDPPSDYSSVLESTDSIHPGDLFFSRECNAIQGKNNDNNSSLPRRIQQREYFSPRPSVNTVRIIPPESKGSNGNININMNNLSRSNNTGLSSAAASRKGSGTGKPSSVTSEGSGKTTASMKKFTANRKKNLQKDTWFACMRTGNCRIARKSPERRPIDESSFIERAVVVSPGSCPHILLQGPSGSGKRELAMALLREIYGDACCNILLQLSHDLRQFPIQDQRLKKVSVPITSSSHHMELDVNSEPNAKYALMGLIKEISNVYAIAPEVSNINFKSDFKVIILHDVHKAVDNIQHIIKWIIDRYSDICKLVLCCEDDADIIEPVKNRFKIIQVDAPQNHEITEVLIQIAKNEEIDLSMNFAAKIATKSTQNLRKAIMALEACKAHNLLSIRGKFQMLLLDFVHPKLILQKLVEHLLKRIEASLKRELYYWHAYYDRRLPPGITALLKLEEFVAKFMSMCRKNSGSRQYVKGN 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1271 655 Gene3D - 342 519 IPR027417 -
Aed11g1271 655 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 164 651 - -
Aed11g1271 655 MobiDBLite consensus disorder prediction 24 45 - -
Aed11g1271 655 PANTHER OS02G0704966 PROTEIN 164 651 - -
Aed11g1271 655 Gene3D - 550 642 - -
Aed11g1271 655 SUPERFAMILY post-AAA+ oligomerization domain-like 562 641 IPR008921 GO:0003677|GO:0006260
Aed11g1271 655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 354 568 IPR027417 -
Aed11g1271 655 MobiDBLite consensus disorder prediction 247 302 - -
Aed11g1271 655 MobiDBLite consensus disorder prediction 242 302 - -
Aed11g1271 655 MobiDBLite consensus disorder prediction 1 23 - -
Aed11g1271 655 CDD AAA 358 381 - -
Aed11g1271 655 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1271 Aed-Chr11 17813516 17817095 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1271 351 641 Core DNA Replication Machinery Family AT5G27740 32.822 7.84e-52 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1271 K10756 - gmx:100795321 1046.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1271 11 17813516 17817095 Aed11g1271 11 17813516 17817095 ECH