Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1258 ACCAACTCCAACTTTTTCTATCCTTCCATTGCGCCTTTTATTCCAACTCGTTCTCTGTCATGCAATAACTTTCTTCTCTATAAATACCATGCATACCCCATCACGGTGCTCATTCAATCCAGCTTGAAAACACATCTTCAACATTCAACAACCCTTCTTTTGTTCTGTGCAAGGAATAACTCAACTATGGCCAATTCTATAAACTTTCTCCTACTTCTGTCTCTACTAGCCTTTGCTCCCTTATGTCACTGCAATGAGAAAATAGGAGGTTACCTCTATCCTCAGTTTTACGACGGTTCATGCCCCAGAGCTCAAGAGATTGTCCAATCCATCGTTGCCAAGGCTGTGGCAGAAGAGCCTCGCATGGCTGCTTCCTTGCTCAGACTACATTTCCATGATTGTTTTGTCAAGACTGGTGGACCAAACTGGGAAGTACCTTTAGGCAGAAGGGACTCTCTTGGTGCGAGTATTAGTGGCTCAAATAACAACATTCCTGCTCCCAACAACACATTCCAGACCATCTTAACCAAGTTCAAGCTTAAGGGGCTTGACATTGTTGATTTTGTTGCTCTATCTGGGAGCCACACAATAGGAAATTCCCGATGCACCAGCTTCAGGCAAAGACTATACAACCAAACAGGTAATGGAAAAGCAGACTTCACTCTTGATCAAGTGTATGCTGCTGAATTGCGCACTCGGTGTCCAAGATCTGGTGGGGACCAGAATCTCTTTGTCTTAGACTTTGTTACCCCAGTTAAATTTGACAACCACTATTACAAAAACTTGTTGGCTAACAAGGGTCTGTTAAGTTCTGACGAAATTCTCTTGACAAAGAATCAAGTGTCAGCAGATTTAGTGAAGCAGTATGCAGAAAACAACGATCTTTTCTTTGAACATTTTGCCAAGTCTATGGTTAAGATGGGAAACATTACTCCTTTAACAGGGTCAAGGGGAGAGATCAGAAAGAACTGCAGAAGAGTTAACAAGTGA 990 0.4242 TNSNFFYPSIAPFIPTRSLSCNNFLLYKYHAYPITVLIQSSLKTHLQHSTTLLLFCARNNSTMANSINFLLLLSLLAFAPLCHCNEKIGGYLYPQFYDGSCPRAQEIVQSIVAKAVAEEPRMAASLLRLHFHDCFVKTGGPNWEVPLGRRDSLGASISGSNNNIPAPNNTFQTILTKFKLKGLDIVDFVALSGSHTIGNSRCTSFRQRLYNQTGNGKADFTLDQVYAAELRTRCPRSGGDQNLFVLDFVTPVKFDNHYYKNLLANKGLLSSDEILLTKNQVSADLVKQYAENNDLFFEHFAKSMVKMGNITPLTGSRGEIRKNCRRVNK 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1258 329 PANTHER PEROXIDASE 72-RELATED 138 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed11g1258 329 PANTHER PEROXIDASE 72-RELATED 67 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed11g1258 329 PRINTS Plant peroxidase signature 181 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed11g1258 329 PRINTS Plant peroxidase signature 125 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed11g1258 329 PRINTS Plant peroxidase signature 101 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed11g1258 329 ProSiteProfiles Plant heme peroxidase family profile. 91 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed11g1258 329 PRINTS Haem peroxidase superfamily signature 123 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed11g1258 329 PRINTS Haem peroxidase superfamily signature 183 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed11g1258 329 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed11g1258 329 Gene3D - 138 328 - -
Aed11g1258 329 Gene3D Peroxidase, domain 2 165 308 - -
Aed11g1258 329 Pfam Peroxidase 137 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed11g1258 329 ProSitePatterns Peroxidases active site signature. 123 134 IPR019794 GO:0004601
Aed11g1258 329 SUPERFAMILY Heme-dependent peroxidases 92 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed11g1258 329 CDD secretory_peroxidase 92 327 IPR033905 GO:0004601|GO:0042744
Aed11g1258 329 Gene3D - 92 137 - -
Aed11g1258 329 PANTHER PEROXIDASE 138 328 - -
Aed11g1258 329 PANTHER PEROXIDASE 67 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1258 Aed-Chr11 17721008 17722769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1258 103 328 Peroxidase AT5G66390 69.737 3.06e-112 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1258 K00430 - gmx:100788562 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1258 11 17721008 17722769 Aed11g1258 11 17721008 17722769 ECH