Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1252 ATGATGCCTGAACGAGCTAATCTGCACATAGCCTTAACATTTTTGCAATTTTGTTATGCAGGAAATCATATATTTCTGAGAATTGCACTTGATACAGGTGTAAGCAAGCTTATCTTTCCTGTCTACAGAAACATCACCGCCTTGCTTCTTCTGTCTCCCCTCGCTTATTTTTCAGAGAAGAAAGACAGGCCATCAATAACCAATTATTGTGTGCTACACTTTTTCCTTCTTGGACTTGTTGGAATAACAATGAAAGAAGGATTCTACCTCTTGGGTTTGGAGAAAACATCACCTACCTTTGCTGCTGCTATGCAGAACTCTAGCGTGCACTTCAATAGGATTGATGGTGTGGCTAAGGTCATTGGTGTCCTTGCTTCTGTTGGAGGAGCTTCAATTATTACCCTTTACAAGGGACCTGTTATTTATACTCCACATTTAGCATTATTACATCAGGAACATTACTTGTCAACATTGGGGGATGCCACGGGAAAGGACTGGAACTTGGGTGGCATCTATCTCTTTGGTCACTCCTTATGTTGGTCTGGTTGGATTGTGATGCAAGCATCTGTTCTGAAAAAGTACTCAGCCCCACTCACAGTTTCTGCATTCACATGCTTCTTTGGTGTTGTGCAGTTTTTGACAATTGCAGCCTTTTTTGAGAAGGATTCCAAAGCCTGGCAGTTCAATTCTAGTGGAGAGATCTATAGTGTCTTGTTCTCGGGACTAGTGACTTCAGGACTGGCATCAGCAATACAGATATGGACTATTGGCAAAGGAGGGCCAGTGCTTGCTTCAATTTATCTACCTTTACAAACATTACTTGTAGCTGTGATGGCATCTTTTATTTTCGGTGAAGAATTCTTCTTGGGAGGCATTATTGGAGCATTCTTAATTATATCCGGCTTGTACCTTGTTGTTTGGGGAAGAAGTCAAGAAACCAAGTCTGCCAAAGAGGTGATAGTCTCCATTGAGCCCAAGAATCATTGGGAAGAAAAAAGCGATTGTTCATCCCTCACCCAACCATTGATTACTACTACACAAAGCTCTTAG 1050 0.4162 MMPERANLHIALTFLQFCYAGNHIFLRIALDTGVSKLIFPVYRNITALLLLSPLAYFSEKKDRPSITNYCVLHFFLLGLVGITMKEGFYLLGLEKTSPTFAAAMQNSSVHFNRIDGVAKVIGVLASVGGASIITLYKGPVIYTPHLALLHQEHYLSTLGDATGKDWNLGGIYLFGHSLCWSGWIVMQASVLKKYSAPLTVSAFTCFFGVVQFLTIAAFFEKDSKAWQFNSSGEIYSVLFSGLVTSGLASAIQIWTIGKGGPVLASIYLPLQTLLVAVMASFIFGEEFFLGGIIGAFLIISGLYLVVWGRSQETKSAKEVIVSIEPKNHWEEKSDCSSLTQPLITTTQSS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1252 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 213 310 - -
Aed11g1252 349 Pfam EamA-like transporter family 16 109 IPR000620 GO:0016020|GO:0016021
Aed11g1252 349 Pfam EamA-like transporter family 169 306 IPR000620 GO:0016020|GO:0016021
Aed11g1252 349 PANTHER WAT1-RELATED PROTEIN 5 325 IPR030184 GO:0016021|GO:0022857
Aed11g1252 349 PANTHER WAT1-RELATED PROTEIN 5 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1252 Aed-Chr11 17678714 17681113 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1252 2 343 Nodulin-like Gene Family AT1G75500 52.973 6.53e-132 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1252 - - gmx:100790386 607.06