Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1249 ATGAAAACCACCTCGGTTTCCAAAATGCAGTTTGCGGCATTCTTTTGTTTGGCATTGTGGTTGGGTTTTCAGCTTGACTGGGCTCACTGCAGCGTTACCTACGACAGAAAAGCCATTCTCATCAATGGCCAAAGGAGATTCCTTTTTTCTGGTTCTATACATTACCCCAGAAGCACCCCAGATATGTGGGAAGATCTGATTTACAAGGCCAAAGAAGGAGGTCTAGACGTTATTGAAACCTATGTCTTTTGGAATGTTCACGAGCCTTCTCCTGGCAATTACAACTTTGAAGAAAGGTATGATCTGGTGAGGTTCGTGAAGACAATACAGAAAGCAGGGCTGTATGCTCATCTTCGCATTGGACCTTATATCTGTGCAGAATGGAATTTCGGAGGATTTCCTGTTTGGCTCAAGTATGTTCCGGGCATCAGCTTTAGAACAGACAATGAACCTTTCAAGAAAGCAATGCAAGGGTTCACCGAGAAGATTGTGGGAATGATGAAGAGTGAGCGTCTCTATGAATCTCAGGGTGGCCCTATCATACTCTCTCAGATTGAGAATGAGTATGGGGGACAGAGTAAATTACTTGGACCTGCTGGCCAAAATTATATGAAGTGGGCTGCAAAAATGGCTGTGGAAACGGGAACTGGGGTCCCCTGGGTGATGTGCAAGGAAGATGATGCGCCAGATCCTGTGATGCACCATCCACATTATTTGTTGTTGTTTGTTTGTTTTGTGTTTTCTGAATTTGGAGGTCCAAATCATGAAAGACCTGTTCAGGATTTGGCATTTGGAGTTGTCCGATTCATACAGAAAGGAGGATCCTTTGTAAACTACTACATGTATCATGGAGGAACCAATTTTGGCCGTACAGCTGGAGGCCCTTTCATCACTACAAGTTATGACTATGATGCTCCACTGGATGAATATGGTTTGATTAGGCAACCAAAGTATGGTCATCTAAAGGAGCTTCATAAGGCTATTAAGATGTGTGAGCGAGCTTTAGTTTCAACTGATCCAGTTGTTACTTCATTGGGGAACTTCCAACAGGCTCATGTATACTCTACAAAATCTGGAGATTGTGCTGCTTTCCTCTCAAACTTTGATACAAAATCTTCTGTTAGAGTGATGTTCAACAATATGCACTATAACTTACCTCCTTGGTCCATCAGCATCCTCCCTGATTGCAGAAATGTTGTTTTTAATACAGCAAAAGTTGGAGTGCAAACATCTCAGATGCAAATGTTACCAACAAATACTCATATGTTCTCATGGGAGAGCTTTGATGAAGACATTTCTTCTCTTGATGACGGCTCTACATTTACAATCACTACTTCTGGTCTCTTAGAACAGATAAATGTAACACGGGATACAAGTGATTATCTTTGGTATATAACCAGTGTCGATATAGGTTCATCCGAATCCTTTCTCCATGGAGGCAAACTACCCACTCTCATTGTTCAATCCACAGGCCATGCTGTTCATGTTTTTATCAATGGTCAACTTTCTGGTTCTGCCTATGGAACGAGGGAGGATAGGAGATTCAGATATACTGGCACATTAAACCTCCGTGCTGGAACAAACAGAATAGCTCTGCTCAGTGTTGCTGTTGGACTTCCTAATGTGGGAGGGCATTTTGAGACTTGGAACACAGGAATCCTTGGTCCAGTTGTACTCCGTGGACTTAACCAAGGAAAGTGGGATTTATCTTGGCAGAAATGGACTTATCAGGTTGGGCTGAAAGGAGAGGCCATGAATCTTGCATCTCCAAATGGTATCTCTTCCGTAGAGTGGATGCAGTCAGCATTAATTTCAGATAAAAATCAACCACTGACATGGCACAAGACTTATTTTGATGCTCCAGATGGAGACGAGCCGTTGGCATTGGACATGGAGGGTATGGGTAAAGGTCAAATATGGATTAATGGGCTGAGCATTGGAAGATACTGGACTGCTCCGGCTGTTGGTAATTGCAATGGTTGTAGCTATGCCGGCACATTCAGACCTCCAAAGTGCCAGGTTGGTTGTGGTCAACCAACCCAGCGATGGTACCATGTGCCTCGATCTTGGTTGAAGCCAAATCATAATCTGTTAGTTGTTTTTGAGGAACTTGGAGGAAATCCTTCAAAAGTTTCACTTGTAAAGAGATCAGTGAGCAGTGTCTGTGCTGATGTGTCTGAGTACCACCCTAACATTAGGAATTGGCACATTGATAGCTATGGAAAATCAGAAGAGTTCCATCCTCCAAAGGTTCACTTGCATTGTAGTACTGGCCAGACTATTTCATCCATTAAATTTGCAAGCTTTGGAACTCCTTTGGGAACATGTGGGAATTATGAAAAGGGAGTTTGTCACTCTCCCACTTCATATGCCACCCTAGAGAAGAAATGTATAGGAAAGCCAAGATGCACGGTCACTGTATCAAACAGTAACTTTGGGAAAGACCCTTGTCCAAATGTGTTGAAGCGGTTATCAGTTGAAGCTGTTTGCGCTCCAACTAAATGGAGGGGCTGA 2514 0.4312 MKTTSVSKMQFAAFFCLALWLGFQLDWAHCSVTYDRKAILINGQRRFLFSGSIHYPRSTPDMWEDLIYKAKEGGLDVIETYVFWNVHEPSPGNYNFEERYDLVRFVKTIQKAGLYAHLRIGPYICAEWNFGGFPVWLKYVPGISFRTDNEPFKKAMQGFTEKIVGMMKSERLYESQGGPIILSQIENEYGGQSKLLGPAGQNYMKWAAKMAVETGTGVPWVMCKEDDAPDPVMHHPHYLLLFVCFVFSEFGGPNHERPVQDLAFGVVRFIQKGGSFVNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLIRQPKYGHLKELHKAIKMCERALVSTDPVVTSLGNFQQAHVYSTKSGDCAAFLSNFDTKSSVRVMFNNMHYNLPPWSISILPDCRNVVFNTAKVGVQTSQMQMLPTNTHMFSWESFDEDISSLDDGSTFTITTSGLLEQINVTRDTSDYLWYITSVDIGSSESFLHGGKLPTLIVQSTGHAVHVFINGQLSGSAYGTREDRRFRYTGTLNLRAGTNRIALLSVAVGLPNVGGHFETWNTGILGPVVLRGLNQGKWDLSWQKWTYQVGLKGEAMNLASPNGISSVEWMQSALISDKNQPLTWHKTYFDAPDGDEPLALDMEGMGKGQIWINGLSIGRYWTAPAVGNCNGCSYAGTFRPPKCQVGCGQPTQRWYHVPRSWLKPNHNLLVVFEELGGNPSKVSLVKRSVSSVCADVSEYHPNIRNWHIDSYGKSEEFHPPKVHLHCSTGQTISSIKFASFGTPLGTCGNYEKGVCHSPTSYATLEKKCIGKPRCTVTVSNSNFGKDPCPNVLKRLSVEAVCAPTKWRG 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1249 837 SUPERFAMILY Galactose-binding domain-like 572 738 IPR008979 -
Aed11g1249 837 Pfam Beta-sandwich domain in beta galactosidase 335 406 IPR041392 -
Aed11g1249 837 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 177 189 IPR019801 GO:0004553|GO:0005975
Aed11g1249 837 Pfam Glycosyl hydrolases family 35 39 231 IPR031330 -
Aed11g1249 837 Pfam Glycosyl hydrolases family 35 235 327 IPR031330 -
Aed11g1249 837 PRINTS Glycosyl hydrolase family 35 signature 63 81 IPR001944 GO:0004553|GO:0005975
Aed11g1249 837 PRINTS Glycosyl hydrolase family 35 signature 636 652 IPR001944 GO:0004553|GO:0005975
Aed11g1249 837 PRINTS Glycosyl hydrolase family 35 signature 118 137 IPR001944 GO:0004553|GO:0005975
Aed11g1249 837 PRINTS Glycosyl hydrolase family 35 signature 295 311 IPR001944 GO:0004553|GO:0005975
Aed11g1249 837 PRINTS Glycosyl hydrolase family 35 signature 275 290 IPR001944 GO:0004553|GO:0005975
Aed11g1249 837 PRINTS Glycosyl hydrolase family 35 signature 609 623 IPR001944 GO:0004553|GO:0005975
Aed11g1249 837 PRINTS Glycosyl hydrolase family 35 signature 42 59 IPR001944 GO:0004553|GO:0005975
Aed11g1249 837 Gene3D - 744 836 IPR043159 -
Aed11g1249 837 Gene3D Glycosidases 26 331 - -
Aed11g1249 837 PANTHER BETA-GALACTOSIDASE 3 6 826 - -
Aed11g1249 837 Pfam Galactose binding lectin domain 753 830 IPR000922 GO:0030246
Aed11g1249 837 Gene3D - 401 560 - -
Aed11g1249 837 ProSiteProfiles SUEL-type lectin domain profile. 749 831 IPR000922 GO:0030246
Aed11g1249 837 PANTHER BETA-GALACTOSIDASE RELATED 6 826 IPR001944 GO:0004553|GO:0005975
Aed11g1249 837 SUPERFAMILY (Trans)glycosidases 31 332 IPR017853 -
Aed11g1249 837 SUPERFAMILY Galactose-binding domain-like 390 563 IPR008979 -
Aed11g1249 837 Gene3D - 583 723 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1249 Aed-Chr11 17666233 17672226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1249 4 836 Glycoside Hydrolase AT4G36360 76.788 0.0 1374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1249 - - gmx:100798501 1637.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0084 11 686472 692084 Aed11g1249 11 17666233 17672226 ECH
Aed9g0263 9 1876480 1880764 Aed11g1249 11 17666233 17672226 ECH
Aed11g1249 11 17666233 17672226 Aed11g1249 11 17666233 17672226 ECH