Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1243 ATGGGACGGGTCGCGTGGAAGCCAACAACCACCAAAAAGATCATTGATCAGTATCAGAAGACTTTGGGGGATATTGATCTGTGGCGTTCTCACTATGAGAAAATGCTTGATAACCTGAAGAAGCTGAAAGATATTAACAACAAACTCAGGAGACAGATCAGGCATAGGATAGGTGAGGGTTTTGACATGGACGACATGAGCTTCCAGCAACTGCGCACTCTTGAAGAGGATATGGTTTCTTCCATTGGGAAAATACGCGAACGAAAGTTCCACGTGATCAAAACTCGGACTGATACCTGCAGGAAAAAGGTGAAAAGCCTGGAGCAGATGAATGGAAATCTGCTGCTTGAACTTAAGGAAAAGTGTGTGATCCATCCACAATTTATTTTGCACGATGAAGGAGACGAGGAATCAGCAGTTGCACTGGCCAACGGCGCCTCCACCCTGTATGCGTTCTGTCATCAACACAATACTCATCTGAATCACCATGTCCATGATGGACCTGCTCTTCATGAACCCTTTAAAACTGATGATCTACGCCTTGCTTGA 549 0.4517 MGRVAWKPTTTKKIIDQYQKTLGDIDLWRSHYEKMLDNLKKLKDINNKLRRQIRHRIGEGFDMDDMSFQQLRTLEEDMVSSIGKIRERKFHVIKTRTDTCRKKVKSLEQMNGNLLLELKEKCVIHPQFILHDEGDEESAVALANGASTLYAFCHQHNTHLNHHVHDGPALHEPFKTDDLRLA 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1243 182 PANTHER FLORAL HOMEOTIC PROTEIN DEFICIENS ISOFORM X1 8 167 - -
Aed11g1243 182 Coils Coil 32 52 - -
Aed11g1243 182 ProSiteProfiles K-box domain profile. 32 124 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aed11g1243 182 PANTHER SERUM RESPONSE FACTOR HOMOLOG 8 167 - -
Aed11g1243 182 Pfam K-box region 30 117 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1243 Aed-Chr11 17626739 17629927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1243 9 177 MADS-box Gene Family AT3G54340 36.471 8.46e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1243 K09264 - gmx:100784496 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1243 11 17626739 17629927 Aed11g1243 11 17626739 17629927 ECH