Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1240 ATGGATTGGCAAAGCATCATGGGCAACCACAACACCATCGTACTCCTCCTCGTCCCACTAATAACACTACTCCTGTTGTTGGCGTTAGTATCTCGTACTCGTCGAAGAGCGCCATACCCACCGGGCCCAAAGGGGCTACCAATCATAGGAAACATGCTAATGATGGAGCAGCTAACCCACCGCGGTCTCGCCAGACTGGCCAAACAATACGGCGGCATCTTCCACCTCCGCATGGGGTTCCTCCACATGGTCGCCATCTCCGACCCCGAGGCGGCGCGTCAGGTTCTCCAAGTCCAAGACAACATCTTTTCGAACCGTCCCGCGACAATCGCCATCAGCTACCTCACCTACGACCGCGCCGACATGGCTTTCGCCCACTACGGCCCCTTCTGGCGCCAGATGAGGAAGCTCTGCGTCATGAAACTCTTCAGCCGCAAGCGCGCCGAGTCGTGGCAGTCCGTCCGTGACGAGGTCGACGCCGCCGTCCGCACCGTCGCCACCAGCGTCGGAAAGCCCCTCAACATCGGAGAGCTGGTGTTTAACCTCACGAAAAACATAATCTACCGCGCCGCGTTTGGGTCCAGCTCGCAGGAGGGGCAGGACGAGTTCATTGGAATACTGCAGGAGTTTTCTAAACTGTTTGGCGCGTTTAATATCGCTGATTTCATACCCTACCTTGGGCGCGTGGACCCGCAGGGACTCAACGCGCGCCTCGCTAGGGCTCGTGGCGCACTCGATAGCTTCATCGATAAAATCATCGACGAGCACGTGCAGAAGAGGAATGATAAGAATAATACTGAAATTAATGGTGATGCAGAAACGGACATGGTGGATGAGTTGCTGGCTTTCTACAGCGAAGAGGCGAAGTTGAACAATGAATCGGAGGATTTGCAGAACTCTATCAGACTCACTAAGGATAACATCAAAGCTATCATTATGGACGTGATGTTCGGAGGCACTGAAACGGTGGCGTCAGCGATCGAGTGGGCCATGGCGGAGCTCATGAGAAGCCCAGAAGATCAAAAGCGGGTCCAACAAGAGCTCGCGGATGTAGTGGGCCTGAACCGTCGTGTTGAAGAGTCCGATTTTGAGAAACTCACTTTTCTCAAATGTGCCCTCAAAGAGACCCTCCGCCTCCACCCTCCGATCCCGCTCCTCCTCCACGAGACGGCGGAGGACGCCACTGTCGGCGGCTACCTCGTCCCCAAGAAGGCGCGTGTCATGATCAACGCGTGGGCCATTGGGAGGGACAAGAACAGCTGGGAGGAGCCCGAAACATTCAAGCCCGCCCGGTTCCTTAAACCGGGCGTACCCGATTTCAAGGGGAGCAACTTCGAGTTCATTCCATTCGGGTCGGGTCGAAGATCCTGCCCCGGGATGGTGTTGGGGCTCTACGCGCTGGAGTTGGCGGTGGCTCACCTCCTTCATTGCTTCACGTGGGAATTGCCAGATGGGATGAAACCAAGTGAGATGGACATGGGTGACGTGTTTGGACTCACCGCTCCATTGTCCACGCGACTCATTGCTGTACCAACCAAGCGCGTGGTCTGCCCTCTCTTTTAA 1563 0.5598 MDWQSIMGNHNTIVLLLVPLITLLLLLALVSRTRRRAPYPPGPKGLPIIGNMLMMEQLTHRGLARLAKQYGGIFHLRMGFLHMVAISDPEAARQVLQVQDNIFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWQSVRDEVDAAVRTVATSVGKPLNIGELVFNLTKNIIYRAAFGSSSQEGQDEFIGILQEFSKLFGAFNIADFIPYLGRVDPQGLNARLARARGALDSFIDKIIDEHVQKRNDKNNTEINGDAETDMVDELLAFYSEEAKLNNESEDLQNSIRLTKDNIKAIIMDVMFGGTETVASAIEWAMAELMRSPEDQKRVQQELADVVGLNRRVEESDFEKLTFLKCALKETLRLHPPIPLLLHETAEDATVGGYLVPKKARVMINAWAIGRDKNSWEEPETFKPARFLKPGVPDFKGSNFEFIPFGSGRRSCPGMVLGLYALELAVAHLLHCFTWELPDGMKPSEMDMGDVFGLTAPLSTRLIAVPTKRVVCPLF 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1240 520 Pfam Cytochrome P450 40 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed11g1240 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Aed11g1240 520 Coils Coil 287 307 - -
Aed11g1240 520 Gene3D Cytochrome P450 32 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed11g1240 520 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed11g1240 520 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed11g1240 520 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed11g1240 520 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed11g1240 520 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed11g1240 520 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed11g1240 520 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed11g1240 520 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed11g1240 520 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed11g1240 520 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed11g1240 520 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed11g1240 520 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed11g1240 520 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 1 520 - -
Aed11g1240 520 PANTHER CYTOCHROME P450 84A1-RELATED 1 520 - -
Aed11g1240 520 SUPERFAMILY Cytochrome P450 33 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1240 Aed-Chr11 17590150 17594555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1240 47 519 Monolignol Biosynthesis Gene Families AT4G36220 77.590 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1240 K09755 - gmx:100793538 914.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1240 11 17590150 17594555 Aed11g1240 11 17590150 17594555 ECH