Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1224 ATGTATCAAATTATTTTGCAGTATTTTCATGAACATTGTGCAAATGACTATTACTCTTCAAAAGTTGGCAAGAATTATGAAGATCATCTTCAAGCAAGGAGATCATCAAGAAGGCTTTCAACTATTGACGAGTTAGATTATGGTCGACCACCTGGTTTTGAAGGCAATCATCTTCAAGCTGCTGCAATAATTCCTACAGTTAAATGGGAATGCCCTCCCCGGTTTGCTTTGAATATTTCTGAGTGGAAAATAGTAACTGCTGAAGAGAGTACAGAGAGAGATGATCAGAGGGAAAGAGAATTGCGAGTGCTTGAAGCAGTTTACCCTCGTGCTTCTCACACTCCTCGTGAGCCTCACTGTTCTTGGGATGTGAAGAATGAGAGGTACAATGATAGGCGCACTCCTCTGGTCCCTCTTATAGGAGAAGAAGAGTGGGCAGAAAATATTAAAAAAGATGATGTTGTTGTTAATACTTCAACTACTGCCGCCGTTAATGATGCAGAAGCATGTGATTTGGTAGGTGACATGTTAATACCAGATGAGGAAGGGAAGTTAATGGTTGATCCGAATTTACTACTTGAAAGGGCTAAGGATCCGTTATTCCTTCAACGATATAGAGATGCCATCATCAGGATTAATATTAATAACCCTACTCCAATTACTGTTGATTATCTGATGAGTATGCCTGCACCTGCACCTGCACGTGCACGTGAACCTGCTGAAACAGTTAGAAGGGCACGTACATCCCCACCGCCGGAACAAAGAGGAATAAAGAGAGGAGCAGGAGCAGGAGCAGCAGCATCTGAAAGGAAAAGGAATCACTACAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGGAGATGCGGGTGGCGAGGAAGAAGGAGAAGGACGTGGAATATTATAGGAGGCTTGCAGCACCAGATGTGATCAATAAACGATGTAAATACTTCAACACTTCGAGGAGTTGCCGCAATGGCTATCGTTGCCGTTATCGGCATGATAGGCCCAAAGAAGTTTGGAGGATGTAA 1026 0.4327 MYQIILQYFHEHCANDYYSSKVGKNYEDHLQARRSSRRLSTIDELDYGRPPGFEGNHLQAAAIIPTVKWECPPRFALNISEWKIVTAEESTERDDQRERELRVLEAVYPRASHTPREPHCSWDVKNERYNDRRTPLVPLIGEEEWAENIKKDDVVVNTSTTAAVNDAEACDLVGDMLIPDEEGKLMVDPNLLLERAKDPLFLQRYRDAIIRININNPTPITVDYLMSMPAPAPARAREPAETVRRARTSPPPEQRGIKRGAGAGAAASERKRNHYREREREREREEMRVARKKEKDVEYYRRLAAPDVINKRCKYFNTSRSCRNGYRCRYRHDRPKEVWRM 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1224 341 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 11 336 - -
Aed11g1224 341 Coils Coil 275 295 - -
Aed11g1224 341 MobiDBLite consensus disorder prediction 269 290 - -
Aed11g1224 341 ProSiteProfiles Zinc finger C3H1-type profile. 307 335 IPR000571 GO:0046872
Aed11g1224 341 MobiDBLite consensus disorder prediction 233 290 - -
Aed11g1224 341 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED 11 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1224 Aed-Chr11 17449746 17451090 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aed11g1224 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1224 - - gsj:114373954 173.711