Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1219 ATGATGGAACAACCTCAGCAACAACAAGGAAGCCAACAACAACAACAAAACAACGAGGATGGTGGCAGTGGAAAAGGTTCGGGGTTTCTGAGCAGGCAAAGTAGTACACGGTGGACACCCACAACCGACCAGATAAGAATATTGAAGGACCTTTACTACAACAATGGAATTAGATCCCCAAGTGCAGAACAGATTCAGAGGATCTCTGCTAGGCTGAGGCAGTACGGTAAGATTGAAGGCAAGAATGTCTTTTATTGGTTCCAGAACCACAAAGCTCGAGAAAGGCAGAAGAAAAGGTTCACTTCTGATATTAATATTAATAATAATGTCCCTGTCCCCCCCATGCACCATAGACCCCCAACAACAACAACCATTCCTCCCATTCACACCAAGTATTCTACTGGGATCTCTTCGGCTTCATCTTCTTCTGTTGAGATGGTTACAATGGGGCAGATGGGGAGTTATGGGTATGGTTCTGTACCCATGGAGAAAAGTTTTAGGGACTGTTCAATTTCTGCTGGGGGTAGCAGTGGCCATGTTGGAATAAACCACAACTTGGGATGGGTCGGAGTGGACCCATATTCCTCAGCCTACACAAACTTCTTCGACAAAATAAGGCCAAGTGAAGAAACCCTGGAAGAAGAACAAGAGAATATGATTGGTGCTACTGAGATTGAAACCCTTCCTTTATTCCCTATGCACGGTGAGGAAATCCATGGCTATTGCAACTTCAAGTCCAATTCTTATAACTATGATGGAAACGGCTGGTATCATACTGAAAATGGCTTCAAGAATGCTTCTCGTGCTTCCTTGGAGCTCAGTCTCAACTCCTACACTCGCAGGTCTCCAGATTATGCTTAA 861 0.446 MMEQPQQQQGSQQQQQNNEDGGSGKGSGFLSRQSSTRWTPTTDQIRILKDLYYNNGIRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDININNNVPVPPMHHRPPTTTTIPPIHTKYSTGISSASSSSVEMVTMGQMGSYGYGSVPMEKSFRDCSISAGGSSGHVGINHNLGWVGVDPYSSAYTNFFDKIRPSEETLEEEQENMIGATEIETLPLFPMHGEEIHGYCNFKSNSYNYDGNGWYHTENGFKNASRASLELSLNSYTRRSPDYA 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1219 286 SMART HOX_1 33 101 IPR001356 GO:0003677
Aed11g1219 286 Gene3D - 30 96 - -
Aed11g1219 286 MobiDBLite consensus disorder prediction 1 41 - -
Aed11g1219 286 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 2 279 IPR044555 GO:0003700|GO:0099402
Aed11g1219 286 SUPERFAMILY Homeodomain-like 28 102 IPR009057 -
Aed11g1219 286 MobiDBLite consensus disorder prediction 104 129 - -
Aed11g1219 286 CDD homeodomain 36 98 IPR001356 GO:0003677
Aed11g1219 286 Pfam Homeodomain 35 96 IPR001356 GO:0003677
Aed11g1219 286 PANTHER PROTEIN WUSCHEL 2 279 - -
Aed11g1219 286 ProSiteProfiles 'Homeobox' domain profile. 31 97 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1219 Aed-Chr11 17421574 17423565 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1219 29 237 Wox Gene Family AT2G17950 42.688 1.34e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Aed11g1219 Homeodomain 1.7e-17 CL0123