Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1211 ATGATTTCTTCATTGCCCTTTTCAACGTCTCTTCCCGCCGTTAACTTCTCCGGCAACGCTGTGTCTTCGCCATCGTGCCGCGTTAAATCCCGCCCAGTAGTCGCCTTCGCCACCGCCACCGCCACTGCTACCGCGGAAGCTCGCTCTTCCTGGACGGAGCAACCTAGGCCTTCGTTTCTGAACTCCTCTTGCTCTTCTCTCTACGATATCCTCGGCATCCCCGCCGGCGCCTCTAACCAAGAAATCAAGGCGGCGTACCGCCGATTGGCCAGAGTCTGCCACCCCGACGTGGCGACGATCGACCGGAAAAACTCCTCGGCGGACGAATTCATGAAGATCCACTCCGCCTACTCTACTCTCTCGGATCCCGTTAAGCGCGCCAACTATGATAGGAGTCTATTCCGGCGACAACGGCCGTTGTCGACGGCGGCGGTGTATTCTGGCTACACGAGTCGGAACTGGGAAACGGATCAGTGCTGGTAG 483 0.5818 MISSLPFSTSLPAVNFSGNAVSSPSCRVKSRPVVAFATATATATAEARSSWTEQPRPSFLNSSCSSLYDILGIPAGASNQEIKAAYRRLARVCHPDVATIDRKNSSADEFMKIHSAYSTLSDPVKRANYDRSLFRRQRPLSTAAVYSGYTSRNWETDQCW 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1211 160 CDD DnaJ 68 122 IPR001623 -
Aed11g1211 160 PRINTS DnaJ domain signature 68 86 IPR001623 -
Aed11g1211 160 PRINTS DnaJ domain signature 86 101 IPR001623 -
Aed11g1211 160 PRINTS DnaJ domain signature 105 125 IPR001623 -
Aed11g1211 160 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 1 160 - -
Aed11g1211 160 SUPERFAMILY Chaperone J-domain 63 136 IPR036869 -
Aed11g1211 160 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Aed11g1211 160 PANTHER - 1 160 - -
Aed11g1211 160 SMART dnaj_3 65 125 IPR001623 -
Aed11g1211 160 Gene3D DnaJ domain 58 154 IPR036869 -
Aed11g1211 160 ProSiteProfiles dnaJ domain profile. 66 133 IPR001623 -
Aed11g1211 160 Pfam DnaJ domain 67 130 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1211 Aed-Chr11 17343493 17343975 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1211 68 130 C2H2 Transcription Factor Family AT1G74250 41.791 1.09e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1211 - - gmx:100800959 286.189