Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1196 ATGGCGGAACCAGTAGCTGTTGTTAATGTTGACCAAGAGTATCTGAAGGAAATAGAGATGGCTCGACGTCAACTTCGCGCTTTCATCGCCACCAACGAATGCGCCCCTCTCATGCTTCGATTAGCGTGGAACGATGCTGCTACCTACAATGTCGGAACCAGAACAGGAGGCCCCAACGGTTCTATCAGAACTGAAAAGGAGTTAAAACAAGAAGCAAACAAGGGATTGGAAAAAGCAACTCAATTATGTGAGAAAGTGAAGGCCAATCTTAAAAAAGTTACATACGCAGACCTTTACCAGCTAGCTGGTGTTGTTGCAATAGAGGTCTCTGGGGGTCCAACTATTGAATTTATTCCTGGGAGAAAAGATTCAAATGAACCTTCAACACAATCTTCAACACCAGAGATTCTTCAAAATATCCAACAAGGTGCATGGAGTTTAAGGAGTATCTTTTCTCGTATGGGTATAAGTGACGATAAAGACATAGTGGCCCTATGTGGAGGCCTCATTTGGGCGGATATTGATCGTCCTGACTCGAAAGTTCAATGGCCAAAGAACCCTTTGAAGTTTGATAACTCCTATTATGAGAAAATATTGAGAAAGGACCCAATATTGAGGTTTCCCAATCCCATGGAAAAGGAAAATGCTTTACTAGACGATCCAAATTTCCGGTTCTATGTTGAAGGGTATTCAAAGGATGAGGATCGTTTCTTCAAAGACTATGCAATGTCACATAAGAAATTCTCTGAACTAGGCTGCAATCTCAAGAAGATAAATCAGAACAGAAGAATTATAGGAATCGGTCTAATTTCTGTGATGACCGTGATATTAGGTTACTTATTCAAGAAGAAGAAAAATCAATCGAAGAAATGA 873 0.4066 MAEPVAVVNVDQEYLKEIEMARRQLRAFIATNECAPLMLRLAWNDAATYNVGTRTGGPNGSIRTEKELKQEANKGLEKATQLCEKVKANLKKVTYADLYQLAGVVAIEVSGGPTIEFIPGRKDSNEPSTQSSTPEILQNIQQGAWSLRSIFSRMGISDDKDIVALCGGLIWADIDRPDSKVQWPKNPLKFDNSYYEKILRKDPILRFPNPMEKENALLDDPNFRFYVEGYSKDEDRFFKDYAMSHKKFSELGCNLKKINQNRRIIGIGLISVMTVILGYLFKKKKNQSKK 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1196 290 Coils Coil 69 89 - -
Aed11g1196 290 PRINTS Haem peroxidase superfamily signature 35 49 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed11g1196 290 PRINTS Haem peroxidase superfamily signature 93 110 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed11g1196 290 PRINTS Haem peroxidase superfamily signature 111 123 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed11g1196 290 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed11g1196 290 Gene3D Peroxidase, domain 2 134 245 - -
Aed11g1196 290 SUPERFAMILY Heme-dependent peroxidases 15 267 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed11g1196 290 PANTHER L-ASCORBATE PEROXIDASE 5, PEROXISOMAL 8 283 - -
Aed11g1196 290 PRINTS Plant ascorbate peroxidase signature 229 253 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed11g1196 290 PRINTS Plant ascorbate peroxidase signature 175 199 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed11g1196 290 PRINTS Plant ascorbate peroxidase signature 111 123 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed11g1196 290 PRINTS Plant ascorbate peroxidase signature 14 34 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed11g1196 290 PRINTS Plant ascorbate peroxidase signature 53 63 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed11g1196 290 PRINTS Plant ascorbate peroxidase signature 67 91 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed11g1196 290 PRINTS Plant ascorbate peroxidase signature 35 50 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed11g1196 290 PRINTS Plant ascorbate peroxidase signature 92 110 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed11g1196 290 ProSiteProfiles Plant heme peroxidase family profile. 45 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed11g1196 290 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 8 283 IPR044831 GO:0004601|GO:0034599
Aed11g1196 290 Pfam Peroxidase 22 233 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed11g1196 290 Gene3D - 21 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1196 Aed-Chr11 17259953 17261718 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1196 91 265 Peroxidase AT4G16270 28.505 5.67e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1196 K00434 - gmx:100813526 383.645