Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1195 ATGGCAAAGGCGAGTAGAGTTGATGGTGAGTATGTGAAGGAAATTGAGAAGGCTCGTCGTGACCTTCGCGCTCTTATCTCCAACAGAAACTGCGCCCCTCTCATGCTTCGATTGGCATGGCATGATGCTGGTACCTACGATGCTAAAACAAAAACAGGAGGCTCCAATGGTTCTATCAGAAACAGACAAGAGTTGAATCACGCAGCCAACAAGGGGCTCGAAACAGCAATTGCCTTCTGTGAGGAAGTGAAGGCCAAGCATCCTAAAGTTTCATATGCCGACCTTTACCAGCTAGCTGGTGTTGTTGCAGTAGAGGTCACCGGGGGTCCAACTATTCACTTTGTTCCTGGGAGAAAAGATTCATTGGAATCTCCAGCAGAGGGTCGTCTTCCAGATGCCAAACAAGGTGCGTCGCATTTAAGAGAGATCTTTTATCGCATGGGTCTAGGTGACAGAGACATTGTGGCTCTATCCGGAGGTCACACCTTGGGTAAGGCACATAAAGATCGTTCTGACTTTCATGGTCAATGGACAAAGGACCCTTTGAAGTTCGATAACTCCTATTTTGTGGAATTACTGAAAGGGGAGTCAAAAGATTTGTTGAAGCTTCCCACAGACAAGGCTCTAGTTGAAGATCCTAATTTCCGCAAGTATGTTGAACTATATGCGAAGGATGAAGATGTTTTTTTCGCAGATTATGCAACCTCACACAAAAAACTCTCAGAGCTTGGCTTCATTTTCAAGAATCATCGTTCCATATTGACCAAAGGAGTTATAGGAATTGCTATTGTCTTAACCGCGGTGATCTTAGGTTACTTACGTGAACTGAACAAAAAAACCAATTGA 846 0.4444 MAKASRVDGEYVKEIEKARRDLRALISNRNCAPLMLRLAWHDAGTYDAKTKTGGSNGSIRNRQELNHAANKGLETAIAFCEEVKAKHPKVSYADLYQLAGVVAVEVTGGPTIHFVPGRKDSLESPAEGRLPDAKQGASHLREIFYRMGLGDRDIVALSGGHTLGKAHKDRSDFHGQWTKDPLKFDNSYFVELLKGESKDLLKLPTDKALVEDPNFRKYVELYAKDEDVFFADYATSHKKLSELGFIFKNHRSILTKGVIGIAIVLTAVILGYLRELNKKTN 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1195 281 PRINTS Haem peroxidase superfamily signature 153 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed11g1195 281 PRINTS Haem peroxidase superfamily signature 90 107 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed11g1195 281 PRINTS Haem peroxidase superfamily signature 32 46 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed11g1195 281 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed11g1195 281 PRINTS Haem peroxidase superfamily signature 108 120 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed11g1195 281 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 1 276 IPR044831 GO:0004601|GO:0034599
Aed11g1195 281 Gene3D Peroxidase, domain 2 131 237 - -
Aed11g1195 281 ProSitePatterns Peroxidases proximal heme-ligand signature. 153 163 IPR019793 -
Aed11g1195 281 ProSiteProfiles Plant heme peroxidase family profile. 23 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed11g1195 281 PRINTS Plant ascorbate peroxidase signature 89 107 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed11g1195 281 PRINTS Plant ascorbate peroxidase signature 11 31 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed11g1195 281 PRINTS Plant ascorbate peroxidase signature 50 60 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed11g1195 281 PRINTS Plant ascorbate peroxidase signature 147 168 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed11g1195 281 PRINTS Plant ascorbate peroxidase signature 32 47 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed11g1195 281 PRINTS Plant ascorbate peroxidase signature 169 193 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed11g1195 281 PRINTS Plant ascorbate peroxidase signature 64 88 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed11g1195 281 PRINTS Plant ascorbate peroxidase signature 221 245 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed11g1195 281 PRINTS Plant ascorbate peroxidase signature 129 146 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed11g1195 281 PRINTS Plant ascorbate peroxidase signature 108 120 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed11g1195 281 Pfam Peroxidase 19 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed11g1195 281 PANTHER L-ASCORBATE PEROXIDASE 5, PEROXISOMAL 1 276 - -
Aed11g1195 281 ProSitePatterns Peroxidases active site signature. 32 43 IPR019794 GO:0004601
Aed11g1195 281 CDD ascorbate_peroxidase 4 247 - -
Aed11g1195 281 SUPERFAMILY Heme-dependent peroxidases 11 248 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed11g1195 281 Gene3D - 18 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1195 Aed-Chr11 17256212 17258727 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1195 35 240 Peroxidase AT4G16270 32.000 4.58e-24 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1195 K00434 - gmx:100806101 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1195 11 17256212 17258727 Aed11g1195 11 17256212 17258727 ECH