Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1164 ATGGTGATCGAGCACGACATTGAGAGCTGCGGGAGCAGAGCGGTGCAATCTTCGCACGCGCATCATCCTCGGCACCACCGCCAGAAGCTCGAGGTGTACAATGAGGTGCTTCGGCGAATTCAGGATTCGGATTGCGAGGAGGCGCACGTTCCCGGCTTCGACGATCAGCTTTGGCTCCACTTCAATCGCCTTCCTGCTAGGTACGCGTTGGATGTGAATGTGGAGAGGGCAGAAGATGTTTTAGCTCACAAGAGATTGCTCAAGTTGGCGGAGGACCCCGCTTCTCGACCTGCATTTCAAGTACGCTTAGTACAGGTATATCCTTTTGGTGGTGCAAATTATACTGATTCCATACATTCCGATCCTTCTGAGATAGAAGATGCACAGAGTTCTCTTAACTATTCTTTAAAGCAGGGAATTCATCCACCACCTACATTTGGTTCATCTTCTAATCTTGAAGCTCTTGCACCTCAAACAACCAAAAATAATATTGAAGATGGGGGGAGTGCTATGAGTGAGACACCATATTCTCCTCGGCCCATGCACGAGATTACCTTTTCAACAGTTGACAAGCCTAAACTCCTTAGTCAGTTAACCGCAATACTTGGTGAGATGGGACTGAATATTCAAGAAGCTCATGCATTTTCCACCACCGATGGATTTTCTCTGGATGTCTTTGTTGTTGAGGGATGGCCTAATGAGGAGCAAAATATGTCAAATCAGGGTATACATTATGCTGCCAATGAACAATACCAGGCAAAGATGGAGCCCTCCCCTCATTGCATTCAAATACCATCTGATGGAGCTGATGTCTGGGAAATTGATACCAACCAGCTAAAATATGAAAACAAAGTTGGCTCTGGATCATTTGGTGACTTGTTCAGAGGTACATATTGTAGTCAAGATGTGGCTATCAAAGTTCTTAAGCCTGAGCGCATAAGTACAGATATGCTGAGGGAGTTTGCGCAGGAAGTTTATATCATGAGGAAGATCCGACACAAGAATGTTGTTCAGTTCATTGGCGCATGTACTAGGCCCCCAAATCTTTGTATTGTTACTGAGTTTATGTCTAGGGGAAGCTTATATGACTTTCTGCACAAACAAAGAGGTGTATTTAAGCTTCCATCTTTGCTAAAAGTAGCCATTGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATAATTCACAGGGACCTCAAGACTGCCAATCTTCTGATGGATGAAAATGAAGTGGTCAAGGTTGCTGATTTTGGGGTTGCCAGGGTGCAAACTCAGTCTGGTGTGATGACAGCTGAAACTGGAACATACCGTTGGATGGCTCCTGAGCTGCCTTACTCTTGCTTGACCCCATTACAAGCAGCAGTTGGTGTGGTGCAGAAGGGCCTACGGCCTACAATTCCCAAAAATACACACCCAAGAATTTCTGAACTGCTTCAGCGGTGCTGGCAACAAGATCCCACGCAGAGACCAAATTTCTCTGAAGTAATAGAAATTCTTCAGCAGATAGCAAAAGGGGTCAATGATCACAAAGATAAATCACCCCATGGTTTTCTATCAGCTCTTAGACGGGCCCATCATTGA 1587 0.4505 MVIEHDIESCGSRAVQSSHAHHPRHHRQKLEVYNEVLRRIQDSDCEEAHVPGFDDQLWLHFNRLPARYALDVNVERAEDVLAHKRLLKLAEDPASRPAFQVRLVQVYPFGGANYTDSIHSDPSEIEDAQSSLNYSLKQGIHPPPTFGSSSNLEALAPQTTKNNIEDGGSAMSETPYSPRPMHEITFSTVDKPKLLSQLTAILGEMGLNIQEAHAFSTTDGFSLDVFVVEGWPNEEQNMSNQGIHYAANEQYQAKMEPSPHCIQIPSDGADVWEIDTNQLKYENKVGSGSFGDLFRGTYCSQDVAIKVLKPERISTDMLREFAQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMSRGSLYDFLHKQRGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVQTQSGVMTAETGTYRWMAPELPYSCLTPLQAAVGVVQKGLRPTIPKNTHPRISELLQRCWQQDPTQRPNFSEVIEILQQIAKGVNDHKDKSPHGFLSALRRAHH 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1164 528 ProSitePatterns Protein kinases ATP-binding region signature. 285 306 IPR017441 GO:0005524
Aed11g1164 528 Gene3D Transferase(Phosphotransferase) domain 1 449 519 - -
Aed11g1164 528 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 16 444 - -
Aed11g1164 528 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 444 518 - -
Aed11g1164 528 MobiDBLite consensus disorder prediction 509 528 - -
Aed11g1164 528 Pfam Protein tyrosine and serine/threonine kinase 279 445 IPR001245 GO:0004672|GO:0006468
Aed11g1164 528 Pfam Protein tyrosine and serine/threonine kinase 454 501 IPR001245 GO:0004672|GO:0006468
Aed11g1164 528 SUPERFAMILY Protein kinase-like (PK-like) 257 501 IPR011009 -
Aed11g1164 528 ProSiteProfiles Protein kinase domain profile. 279 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1164 528 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 16 444 - -
Aed11g1164 528 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 444 518 - -
Aed11g1164 528 SUPERFAMILY ACT-like 181 233 IPR045865 -
Aed11g1164 528 CDD STKc_MAP3K-like 285 501 - -
Aed11g1164 528 ProSitePatterns Serine/Threonine protein kinases active-site signature. 396 408 IPR008271 GO:0004672|GO:0006468
Aed11g1164 528 SMART serkin_6 279 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1164 528 Gene3D Phosphorylase Kinase; domain 1 269 356 - -
Aed11g1164 528 Gene3D Transferase(Phosphotransferase) domain 1 357 448 - -
Aed11g1164 528 ProSiteProfiles ACT domain profile. 183 260 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1164 Aed-Chr11 17067497 17076039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1164 2 527 MAP Kinase Kinase Kinase AT4G35780 64.111 0.0 718
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Aed11g1164 PK_Tyr_Ser-Thr 7.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1164 - - gmx:100816767 1014.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1004 7 7732347 7733199 Aed11g1164 11 17067497 17076039 PCT