Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed11g1145 | ATGTTTTCAACAGCAAAAACACCATCCGAGGAAGAGAAAAAAAGATCAAATGGAAAGGATATTATTGAGGGTGGTGAAGGGGGAGTGGGAGAAGCAGTGAATGTGGCTAAGAAAAAGAAACTAACAGGTTCATCGTCTAGCCACAGTAGTTATTGTCGTGCAGATGAATGTGGTGTGGACTTGAGCATGGCCAAGAGTTACAACCGCCGTCACAAGGTTTGTGACAAACATGCTAAGGCTCCTGTCGTTTTACTTTCTAGCATTCGTCAGAGGTTCTGCCAACAATGTAGCAAGTTCCATGAACTTGTACAGTTTGACGACACCAAAAGAAGCTGCAGGAAAACACTGGCTGAGCATAATGAGCGTAGAAGAAAAGCTCGCTTATTAGGAAATGATCAGCATCAATCAAGTGATTAA | 417 | 0.4269 | MFSTAKTPSEEEKKRSNGKDIIEGGEGGVGEAVNVAKKKKLTGSSSSHSSYCRADECGVDLSMAKSYNRRHKVCDKHAKAPVVLLSSIRQRFCQQCSKFHELVQFDDTKRSCRKTLAEHNERRRKARLLGNDQHQSSD | 138 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed11g1145 | 138 | MobiDBLite | consensus disorder prediction | 7 | 21 | - | - | |
Aed11g1145 | 138 | ProSiteProfiles | Zinc finger SBP-type profile. | 49 | 126 | IPR004333 | GO:0003677 | |
Aed11g1145 | 138 | Pfam | SBP domain | 52 | 125 | IPR004333 | GO:0003677 | |
Aed11g1145 | 138 | SUPERFAMILY | SBT domain | 51 | 127 | IPR036893 | GO:0003677|GO:0005634 | |
Aed11g1145 | 138 | Gene3D | - | 42 | 113 | IPR036893 | GO:0003677|GO:0005634 | |
Aed11g1145 | 138 | PANTHER | - | 9 | 126 | - | - | |
Aed11g1145 | 138 | PANTHER | SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 | 9 | 126 | IPR044817 | GO:0003677 | |
Aed11g1145 | 138 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed11g1145 | Aed-Chr11 | 16951193 | 16951776 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed11g1145 | 36 | 126 | SBP-box Gene Family | AT2G33810 | 57.143 | 2.90e-32 | 109 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | SBP | Aed11g1145 | SBP | 4.8e-30 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed11g1145 | - | - | gmx:100820357 | 174.481 |