Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1139 ATGGTGATATCTGATGAGAACAGTTCTAAACCAATCAACCCCACAAGCTTTCGAGGAGGGTTAGAATGTGTGGGGAACAGAAAGGTGGGGCAGAACAGAAGGGCGTTAAGCGTGATCAACCAGGATCTGGTGGCGGCTGGGAGACCTTACCCCTGTGTTGTTAACAAGAGGGCCTTGCCAGAAAAATATGATGTTTGTGAGAAGAAGCAAGCGGATCCGGGGCATCGACCCATCACAAGGAGGTTTGCTGCACAAATTGCTAGCACCCAGCAAACTTGTGCCGAGGGAACTAAGAAGTCAAACTTAGGGAATTCAATTTCGAATGGATTTGGAGAGAGTATATTTATCGATGAAGAGCTCAATAAGCCAACAACGGAGGACCAGCCAGTGCCAATGTCTTTAGAGCAGACAGAACCAATGCATAGTGAATCAGATCAGATGGAGGAAGTTGAAATGGAGGATATAATTGAAGAGACTGTTCTGGACATCGATACCTGTGATGCAAATAACCCACTTGCAGTAGTGGACTATATTGAAGATCTTTACGCCTACTACAGAAAAATGGAGGGTACTAGCTGTGTCTCACCGAATTATATGACACAACAATTTGACATTAATGAAAGAATGAGATCTATACTGATTGACTGGCTTATTGAGGTGCACGACAAATTCGACCTCCTGCACGAGACATTGTTTCTCACAGTCAATCTCATAGATCGATTTTTGGCAAAGCAGACAGTGGTAAGAAAGAAGCTTCAGCTGGTTGGTCTGGTTGCCATGCTTTTGGCCTGCAAGTATGAAGAGGTTTCCGTACCTGTGGTGGGGGATCTAATTCTCATCTCAGACAGAGCATACACAAGGAAGGAAGTTCTGGAAATGGAGAAGCTGATGGTGAACACATTGCAGTTTAACCTGTCTGTGCCAACAGCATATGTTTTTATCAAAAGGTTCCTAAAGGCAGCTCAATCAGACAGAAAGCTTGAGTTATTGGCTTTCTTCATGGTAGAGCTATCTTTAGTGGAATATGAGATGCTGAAGTTCCCTCCATCTCAGCTAGCAGCAGCTGCAGTCTATACAGCCCAATGCACTCTTTATGGTTTCAAACAATGGAGTAAAACATGTGAATGGCATTCCAATTACTCAGAATCTCAGCTATTAGAGTGCTCTACATTGATGGTTGGTTTTCATAAGAAGGCTGGGAATGGAAAACTTACTGGGGTACATAGGAAGTATTGCTCATCTAAATTTAGCTATACTGCTAAGTGTGAACCAGCACGTTTTCTTCTGGAGAACAACAACAACCCATTGTAG 1311 0.434 MVISDENSSKPINPTSFRGGLECVGNRKVGQNRRALSVINQDLVAAGRPYPCVVNKRALPEKYDVCEKKQADPGHRPITRRFAAQIASTQQTCAEGTKKSNLGNSISNGFGESIFIDEELNKPTTEDQPVPMSLEQTEPMHSESDQMEEVEMEDIIEETVLDIDTCDANNPLAVVDYIEDLYAYYRKMEGTSCVSPNYMTQQFDINERMRSILIDWLIEVHDKFDLLHETLFLTVNLIDRFLAKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDRAYTRKEVLEMEKLMVNTLQFNLSVPTAYVFIKRFLKAAQSDRKLELLAFFMVELSLVEYEMLKFPPSQLAAAAVYTAQCTLYGFKQWSKTCEWHSNYSESQLLECSTLMVGFHKKAGNGKLTGVHRKYCSSKFSYTAKCEPARFLLENNNNPL 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1139 436 PANTHER CYCLIN-B2-1 22 428 - -
Aed11g1139 436 SUPERFAMILY Cyclin-like 169 305 IPR036915 -
Aed11g1139 436 Pfam Cyclin, C-terminal domain 308 423 IPR004367 -
Aed11g1139 436 ProSitePatterns Cyclins signature. 210 241 IPR006671 -
Aed11g1139 436 Gene3D - 180 420 - -
Aed11g1139 436 SUPERFAMILY Cyclin-like 307 425 IPR036915 -
Aed11g1139 436 PANTHER CYCLINS 22 428 IPR039361 -
Aed11g1139 436 CDD CYCLIN 209 298 IPR013763 -
Aed11g1139 436 Pfam Cyclin, N-terminal domain 180 306 IPR006671 -
Aed11g1139 436 SMART Cyclin_C_2 308 425 IPR004367 -
Aed11g1139 436 SMART cyclin_7 312 394 IPR013763 -
Aed11g1139 436 SMART cyclin_7 215 299 IPR013763 -
Aed11g1139 436 CDD CYCLIN 306 393 IPR013763 -
Aed11g1139 436 Gene3D - 194 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1139 Aed-Chr11 16891219 16895073 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1139 1 429 Core Cell Cycle Gene Families AT1G20610 59.497 8.47e-178 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1139 K21777 - gmx:100798068 794.653