Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1129 ATGGGTGTCTGCTTTGCTTCCCTCGCTCGTTGCCAAACAATCTCATCTAAATCAGGCTCGTTAGGGAGTGTGGAAGGAAAGTGTGATGTTAATTCGGAGGAGAATATTAGCGGGATCGGAGGATGCAGTAGCAAGAATATTGTATTTCCGAGAGTGGAAACACGGAAGATGAAGGAGTTCAGTTATGCGGATCTGAAAGCAGCGACAAAGAGTTTCAAGTCTGATACATTGCTTGGTGAAGGAGGCTTCGGAAAAGTATACAAAGGATGGTTGAATGAGAAGACACTCACACCCACCAAACCCGGTTCTGGAATCATGGTAGCTATCAAGAAATTAGATTCCGAAAGCACGCAGGGTCTTCGAGAGTGGCAGTCAGAAATCGACTTGTTAGGAATGATTTCGCACCCAAACCTGGTCAATCTTCTGGGTTACTGCTGTGACGATGTCGAATTTCTCCTTGTGTACGAATTCATGCCAAAGGGAAGCTTGGAGAATCATCTATTTTGGAGAAATACCAACACAGAACCACTCTCTTGGGACACCCGAATCAAAATAGCTATTGGTGCAGCTCGGGGCTTGGTTTACTTGCACACCTCAGAAAGACAAATCATATACAGAGATTTCAAAGCCTCCAATATACTCCTTGATGAGGACTACAATGCAAAAATTTCAGATTTTGGGTTGGCGAAATTAGGGCCTTCTGGTGGAGATTCACACGTGAGTACAAGGATCATGGGAACATATGGCTATGCTGCTCCAGAATACGTTGCAACAGGTCACCTTTATGTGAAGAGTGATGTTTACGGTTTTGGTGTAGTGCTTCTTGAAATGCTGACAGGAATGAGGGCATTTGATAGAAACCGCCCCATAGAGAAGCAGAATCTAGTTGAATGGGCTAAGCCTTTTCTCTATGATAAAACCAAGATTAAAAGCATCATCATGGATGAGAGGATAGAGGGTCAGTATTCAACCAAGGCAGCACTTGAAGCAGCACAGCTTACTCTAAAATGCCTTGAACGTGACCCTAAAATCCGTCCTCACATGAAAGATGTTCTTGAGACTTTGGAATGCATAGAAGCTATCAGGGTTAGAAGGAGAAGGAAAAATGCAAGAAACAATGTTAATTAA 1128 0.4335 MGVCFASLARCQTISSKSGSLGSVEGKCDVNSEENISGIGGCSSKNIVFPRVETRKMKEFSYADLKAATKSFKSDTLLGEGGFGKVYKGWLNEKTLTPTKPGSGIMVAIKKLDSESTQGLREWQSEIDLLGMISHPNLVNLLGYCCDDVEFLLVYEFMPKGSLENHLFWRNTNTEPLSWDTRIKIAIGAARGLVYLHTSERQIIYRDFKASNILLDEDYNAKISDFGLAKLGPSGGDSHVSTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGMRAFDRNRPIEKQNLVEWAKPFLYDKTKIKSIIMDERIEGQYSTKAALEAAQLTLKCLERDPKIRPHMKDVLETLECIEAIRVRRRRKNARNNVN 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1129 375 PANTHER OS01G0588500 PROTEIN-RELATED 27 369 - -
Aed11g1129 375 SUPERFAMILY Protein kinase-like (PK-like) 58 361 IPR011009 -
Aed11g1129 375 ProSiteProfiles Protein kinase domain profile. 72 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1129 375 Gene3D Phosphorylase Kinase; domain 1 43 157 - -
Aed11g1129 375 CDD STKc_IRAK 78 356 - -
Aed11g1129 375 Gene3D Transferase(Phosphotransferase) domain 1 158 374 - -
Aed11g1129 375 Pfam Protein tyrosine and serine/threonine kinase 75 355 IPR001245 GO:0004672|GO:0006468
Aed11g1129 375 ProSitePatterns Protein kinases ATP-binding region signature. 78 111 IPR017441 GO:0005524
Aed11g1129 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Aed11g1129 375 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 27 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1129 Aed-Chr11 16817243 16821607 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1129 58 355 Glycoside Hydrolase AT3G07070 50.836 2.91e-101 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aed11g1129 PK_Tyr_Ser-Thr 3.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1129 - - gmx:100778116 601.282