Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1128 ATGGATTCCTCGCACACCAACACCACTTTCCTCACCAACCTACTACTCTTCAACAACACCCTCCAACCAGAGTTGATGAGGAGCGTGCATGTGTACCGCCAGGGGGATGGGGAGGAAAGGGAAGTTGAGAGAGAGTTTTTGTTTTCAGAGAGTGGCTCCTATGCAGAAATGCAGGCTACCCCGATTCTTAGATTGGTGAAATCTCGTGTTTCTGAGGTGTGTGAAGGGTACCAGAATGGAGTCTGGCTTTGTGTCTTTGCGTTTCATGCCGATCACACTCCTCAATTTTGCCGCATTCCACCGCTTTTGTTGCTCACAAGAAACCCAAAGCTTAATATGATTCCAAACTTGCTTGATGATCTCCACATGATATACAAGTTGGACCAGAAGGAGGAAGACAGAGATATAGCACAAGACTCTGGAGAAAGGCCAGGAAACAGCAACAATTGCCAACCATCACGAAAAGTCTTTCCTGTTCTTGATCAGGATCTCAATTGTCTTCCTTATGAATACAACGAGTCTGAGTTACTGGACAATGAGACAGATGTTGATAGCTCACCAGGTTTGCTATCGAAGAAAAAGAGGGCACCCAGTGAACTTGTAGCAAAAATTTCTTTATCAGATGTGGTCAAGTACTTTGGTATGCCAATTGTAGAAGCATCAAGAAATCTAAATATCGGGCTTACTGTCCTCAAGAGAAAGTGCAGAGAATTTGGTATTCCCCGCTGGCCTCATAGGAAGATCAAATCACTTGACAGTCTCATTAATGATCTTCAGGAAGAAGAGGCAAAGAACCGAGAATTGGAGGACAGGGAAGCAGCCATGGCAGTGGCAAAGAGGCAAAGGATGTTGGAGAGTGAAAAGGAAAACATAGAGAAGAAACCCTTCATGGACATACAAAGTGAGACCAAGAGATTCAGGCAAGATGTTTTCAAGAGAAGACACAGAGCCAGAGCTGTTGGAAAACACAGTTCTACAGTATCCAACACATAG 993 0.4441 MDSSHTNTTFLTNLLLFNNTLQPELMRSVHVYRQGDGEEREVEREFLFSESGSYAEMQATPILRLVKSRVSEVCEGYQNGVWLCVFAFHADHTPQFCRIPPLLLLTRNPKLNMIPNLLDDLHMIYKLDQKEEDRDIAQDSGERPGNSNNCQPSRKVFPVLDQDLNCLPYEYNESELLDNETDVDSSPGLLSKKKRAPSELVAKISLSDVVKYFGMPIVEASRNLNIGLTVLKRKCREFGIPRWPHRKIKSLDSLINDLQEEEAKNRELEDREAAMAVAKRQRMLESEKENIEKKPFMDIQSETKRFRQDVFKRRHRARAVGKHSSTVSNT 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1128 330 ProSiteProfiles RWP-RK domain profile. 186 272 IPR003035 -
Aed11g1128 330 PANTHER PROTEIN RKD5 15 322 - -
Aed11g1128 330 PANTHER PROTEIN RKD4 15 322 IPR044607 GO:0003700
Aed11g1128 330 Coils Coil 251 278 - -
Aed11g1128 330 MobiDBLite consensus disorder prediction 132 153 - -
Aed11g1128 330 Pfam RWP-RK domain 204 251 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1128 Aed-Chr11 16809372 16814323 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1128 21 330 AtRKD Transcription Factor Family AT4G35590 48.466 8.87e-88 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Aed11g1128 RWP-RK 2.2e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1128 - - gmx:113001653 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1128 11 16809372 16814323 Aed11g1128 11 16809372 16814323 ECH