Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1122 ATGGGAGGCTTATTGCACTTTTTGGAATTCAATCAAGGGAGCATGGCCAAAAAAGTCCTTGCTCGTAAGAGACATCATGGTGGCCTGGAAGCTCCTCAAAACAATCTAGATCTGCAAGCACCAATACCTCAGAAATACTGTCCAGAAGGAGAAATACCATACAATTATCAAGTACAGGAAGAGGGCAGGTCTGAGAATAACCGCTATTCAAATGTGGGTTCAATGAAAAAACTGATCAATGAGGAGCTATCCAAACAATCAAACACCAGACAAAATGCGCCAAGCCTTGTGGCAAGGTTAATGGGGATAGATGCGATGCCATTAGACACTAAATATGTTGTTCCATCAGACAAAAAAATAAATGAGAACACGGGGAAGAGGTCTTCAGTCAAAGGAGTGAATCGAAGGGGTTCAGTTAGTTGGGGTTCTTCCAACTTTAATTCTTCTAGCCACATGGATTTTGATTCATTATATGAAGACATGGGTGATGATGACCATGATGGATGGAACTGGAGTTTTGGAGAACCAAGGCCTCGGGAACATCCTCAGGAAGAGGAACTCCAAAAATTCAAGAAAGAGTTTGAAGCATATCAAGCAGCAAGGTTTCTGGAGTGTTCAAAGGTTGCTGAAATTGGCAGTGTTCCTAGACAGTTACTTGCTCAAGAAAACCTGAACAAGGGAATGGTGATGCATAATGATTCAGTTTTACAAAGAGTGGCAGCTGGGAAACTTGCAGATCTTGACAGCCATTCATTCAAAACACCACCACATGACAGTTATGGTTCAGAATATCATGGTAACATGACGGATATGCAGAGGAAAACCTTTCCTCCAAGGAGCAGAACACTAAGTAGAGACTTTGAGGAGACCTTAATGATGAAATCTTGCAACAAATTAGACACGTCTTCTTCTCCCACTAGGATAGTTATTTTGAAGCCTGGTCCTGATAGCATTTGCAACCATGAAGAGAATTGGACCATTTCATCAGGAACTATACAAGGAAGAAATAGTATAGAAGATTTTCTTGAAGAGGTGAAAGAGCGTTTGAAATGTGAACTGCAAGGGAAAATTGTCAAAAAAGGTTCTGTGGTTCGAGGGAGTGGAATTGAGACACCTTACAACGAAAAACCATCTGATCCTAAACTAATAGCCCGTCACATAGTAAAGCATGCCAGAGAAAGTGTGACTAGAGATGCTGACACAAATTTACTCCACTCAGAATCAACAGGATCATACAAAAATGAAATGCAATTCAATGGACCAAGCTCCCCAGAATTTATCAGCAGAGATACCAGGAGGTTATTGTCAGACAGGCTAAGAAATGTTGAGAGAAATGAAGCACATGCTGACATTCCCGAGGGAAAATCAAGGTCACTTGCATTAGACAACCACAAAGCTAGACTAAAGCAAGAAGAGGATAACATGAAGTATGTGAGTAACTGGGAAATTTCCAAAGAGGACACAACAATACAAACAGGATCTTTCAGGCATGAACTCGATGAGAATATATTTCTCCAAAAAGAGTTGTCCCCAAGAAACCTTGTAAGATCCTTGTCTGCTCCTGTATCACGTTCAGGAACATCATTTGGTAAGCTTCTTCTAGAGGACCGCCACATTTTAACTGGTGCTCAGATTCGGAGGAAGCTTGAAGCTGTTGAAACTATGTCTGTTGATGTCAAGAAGCAGAAAAAGGATAGATTTAATATTAAAGAAAGAGTCTCCAATTTTAGATATAATCTTGCTTTAAGAGGGAGGCTTTTTGGCAGAAGGGTTCAATCAATGGTAGAATCACATGGCAATGGATTTGGTCCCTTTGTGAGAGATGTCACAAGTGGACCAACAGTTCTCATGAACTGTGGTGGTGAGAGACATGAGAACTCCACCGAGGTACCTCCTAGTCCTGCATCTGTGTGCAGCAGTGTTCATGAAGACTTTTGGAGGCAGGCTGAATATTTTAGTCCAATATCAACTCCTGATGCCTCTTCAAGAGACGATAATGTTGTGCCCCAGGTTTTCAGAGATATCAGCTCTGGTTTGAATGAGCTAAGGAGACAACTCAATCAACTTGAATCTGATGGTCCTGAGGACTTGACTGTGAAACAGGAGCCTGCTGAGTCTGACTTAGACCAATTAGAGGATCCAGCAGAATCTTACATAAGAGATCTACTTGTTGCTTCTGGTCTGTACTTTGGTTCATGGGATAAATCTTTATTAAGAGGGGACACATTTGCAAAGCCTATAGGCAACTCTGTTTATGAAGAAGTGGAAGAATCTCACAAGAAATTGGTCAAGGAAAATGAGAATAAGCTAGACCACAAAGTTTTGCTTGATTTGTTAAATGAGGCACTTTCAGTTGTTCTTGGACCTCCTTTGACATTGTCTAGATTCAGAAGGAAATTAAGCAACTCTTCCATGTTGCCACCTTCTGGAAAGGAACTGTTGAACTTAGTGTGGGACATTATCCGTGTTTCTTTATATCCTCCATCTGACATATCTACTTATTCACTTGATACTTTGGTGGCTCAACACCTAGGATCCATCCCTTGGTCTGGACTAATAAATGATGAGATCAATATTTTGGAAAGAGGTATAGAATGTCTAATAACTGATGATCTGCTTCAAGAACTCACAAAGGATATATTCTAA 2646 0.407 MGGLLHFLEFNQGSMAKKVLARKRHHGGLEAPQNNLDLQAPIPQKYCPEGEIPYNYQVQEEGRSENNRYSNVGSMKKLINEELSKQSNTRQNAPSLVARLMGIDAMPLDTKYVVPSDKKINENTGKRSSVKGVNRRGSVSWGSSNFNSSSHMDFDSLYEDMGDDDHDGWNWSFGEPRPREHPQEEELQKFKKEFEAYQAARFLECSKVAEIGSVPRQLLAQENLNKGMVMHNDSVLQRVAAGKLADLDSHSFKTPPHDSYGSEYHGNMTDMQRKTFPPRSRTLSRDFEETLMMKSCNKLDTSSSPTRIVILKPGPDSICNHEENWTISSGTIQGRNSIEDFLEEVKERLKCELQGKIVKKGSVVRGSGIETPYNEKPSDPKLIARHIVKHARESVTRDADTNLLHSESTGSYKNEMQFNGPSSPEFISRDTRRLLSDRLRNVERNEAHADIPEGKSRSLALDNHKARLKQEEDNMKYVSNWEISKEDTTIQTGSFRHELDENIFLQKELSPRNLVRSLSAPVSRSGTSFGKLLLEDRHILTGAQIRRKLEAVETMSVDVKKQKKDRFNIKERVSNFRYNLALRGRLFGRRVQSMVESHGNGFGPFVRDVTSGPTVLMNCGGERHENSTEVPPSPASVCSSVHEDFWRQAEYFSPISTPDASSRDDNVVPQVFRDISSGLNELRRQLNQLESDGPEDLTVKQEPAESDLDQLEDPAESYIRDLLVASGLYFGSWDKSLLRGDTFAKPIGNSVYEEVEESHKKLVKENENKLDHKVLLDLLNEALSVVLGPPLTLSRFRRKLSNSSMLPPSGKELLNLVWDIIRVSLYPPSDISTYSLDTLVAQHLGSIPWSGLINDEINILERGIECLITDDLLQELTKDIF 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1122 881 MobiDBLite consensus disorder prediction 690 709 - -
Aed11g1122 881 Pfam DUF761-associated sequence motif 92 107 IPR032795 -
Aed11g1122 881 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 880 - -
Aed11g1122 881 MobiDBLite consensus disorder prediction 250 281 - -
Aed11g1122 881 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 880 - -
Aed11g1122 881 Coils Coil 672 692 - -
Aed11g1122 881 Pfam Domain of unknown function (DUF4378) 717 875 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1122 Aed-Chr11 16766133 16772182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1122 75 880 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 40.423 5.59e-157 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1122 - - gmx:100779720 1522.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1122 11 16766133 16772182 Aed11g1122 11 16766133 16772182 ECH
Aed11g1122 11 16766133 16772182 Aed7g1294 7 10645196 10649325 PCT