Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1114 ATGAGTGGTGTTGGTGTTGGTGTTGGGTGCCCCTGCCCCAGGGGCAATAGTGATCAGTGTTCCATGGAGGATCTCAATGGTGATACGGTTGGGAATTTGAATCAGAGTGCTGCCAAACCTCCAAGGGACACTTCGTCCATTCATCGCCATTGCTCCAGCTCTTCTTGGTCTTTTGAATCGGAACCATATTTAAATATTGCTGGACTTAAATCAAACACAGAAGAAAAAACCGACCTTTCACTTGTAGTGCGATCTGGAAGCTATTCTGATAGAGGACCAAAGCAGTACATGGAGGATGAGTTCATATGTGCTGATATTCTTAGTGAGTGTGTCGATATAAGAGCAGACCTTCCTTCTCCTGCAGCATTTTATGGGGTATTTGATGGACATGGTGGTGTTGATGCAGCATCATTTACCAGAAAGAACATTCTCAAGTTTATAGTTGAAGATTCTCATTTCCCAGCTGCCATTAAGAAAGCAGTTAAGTGTGCATTTGTGAAGGCTGATCTTGCATTCAGAGATGCTAGTTCTCTTGATAATTCCTCAGGCACCACTGCTCTAATAGCCCTTATGTTGGGAAATTCCATGCTGATTGCCAACGCAGGAGATTCTCGTGCTGTATTGGGCAAACGGGGCAGGGCCATTGAACTTTCCAAAGACCATAAGCCAAATTGCACTTCTGAAAGATTAAGAATTGAGAAACTGGGTGGTGTCATCTATGATGGATACCTCAACGGCCAGCTATCAGTGGCGCGTGCTCTTGGAGATTGGCACATCAAAGGTTCTAAAGGTTCCAAGAGCCCTTTAAGCTCTGAGCCGGAGCTAGAGGAGATGGTGCTGTCAGAAGAAGATGAGTTTTTGATAATGGGTTGTGATGGATTGTGGGATGTTATGAGTAGTCAGTGTGCTGTTACAATGGTTAGGAAGGAGCTGATGCAGCATAATGATCCCACCACATGTGCAAAACTACTTGTTGCTGAGGCACTCCAACGCAACACGTGTGACAACCTCACAGCTGTGGTGGTGTGTTTCTCCAAAGATCCACCTCCAAAAATTGAAATTCCTAGATCATATAGGAGGAGGAGTATTTCTGCTGAGGGCCTTGATCTTCTCAAGGGTGTCTTGAATGGTAGATGA 1137 0.4494 MSGVGVGVGCPCPRGNSDQCSMEDLNGDTVGNLNQSAAKPPRDTSSIHRHCSSSSWSFESEPYLNIAGLKSNTEEKTDLSLVVRSGSYSDRGPKQYMEDEFICADILSECVDIRADLPSPAAFYGVFDGHGGVDAASFTRKNILKFIVEDSHFPAAIKKAVKCAFVKADLAFRDASSLDNSSGTTALIALMLGNSMLIANAGDSRAVLGKRGRAIELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGSKGSKSPLSSEPELEEMVLSEEDEFLIMGCDGLWDVMSSQCAVTMVRKELMQHNDPTTCAKLLVAEALQRNTCDNLTAVVVCFSKDPPPKIEIPRSYRRRSISAEGLDLLKGVLNGR 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1114 378 CDD PP2Cc 83 344 IPR001932 -
Aed11g1114 378 PANTHER PROTEIN PHOSPHATASE 2C 16 365 IPR015655 GO:0004722|GO:0006470
Aed11g1114 378 Pfam Protein phosphatase 2C 91 336 IPR001932 -
Aed11g1114 378 PANTHER PROTEIN PHOSPHATASE 2C 47-RELATED 16 365 - -
Aed11g1114 378 ProSiteProfiles PPM-type phosphatase domain profile. 84 344 IPR001932 -
Aed11g1114 378 ProSitePatterns PPM-type phosphatase domain signature. 123 131 IPR000222 GO:0043169
Aed11g1114 378 Gene3D - 66 348 IPR036457 -
Aed11g1114 378 SMART PP2C_4 74 342 IPR001932 -
Aed11g1114 378 MobiDBLite consensus disorder prediction 23 50 - -
Aed11g1114 378 SUPERFAMILY PP2C-like 80 345 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1114 Aed-Chr11 16725464 16728924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1114 68 376 PP2C-type Phosphatase Gene Family AT3G51470 76.052 3.03e-172 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1114 K14803 - gmx:100786416 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1114 11 16725464 16728924 Aed11g1114 11 16725464 16728924 ECH