Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1112 ATGAAATTTCGCGTTTCAACCTCTTTGCTCTCCCTAATTCTTGTCTTCTTCTTCAGCTTATCATTCACCTCACACCAATCCCAAGTCCCTGTTCTCTCTCTTCCACCCCCAGACACAGTTAAACTCAAACCCGCCACGACACTCATTGCTGGCCTCGATGGCACTATGTATCTGGTGGACAGTATTTCCGGGAGGGTCATTTGGTCATTTTCAACTGGATCCCCAATCTACCATTCCTATCGCGCTTCCAATATCAATAACCCTAATGACAAAGACGGCAACTTTACCGGTCTAATTGAATGTGGAGATGACTGGGAATTAATCCTCCATGACCCTCACTTTGGTCAAACGATACTCTCTGAGTCAATTGCAGAATTTGTTGCTTCTACCCCTACTATGACAAAAGAGGGAGCATCTATAGATGGAACCAAAAGAAGCACTACATTTGAAGTAGATGCTGTAACTGGAGGCCTTGTTCGGATTCTAACCGACTCTTATCCTTATGAATATGATGATGACCAGCAGCGTCTTATAACGATAAAGAATAATGAGCTTGTTGATCCTGCACAGCTGAATGCACCTAAATTCTTGCTCAAGATATTCAGGACGGATTATTTTTTGCAATCGGTTGGTCCTGGTTCTGGATTGGTTTTGTGGACTATGAAAGTGGCTGAATTTAAGGCCGTGTTATTTTGCCAACATAATGATAATCCTTCTGGAACCACTTCATTTGATGCAGAGGATGCCTATGTTTTGGATGGTGGCTTGGATTTTGCTATGCCGTATGCATGTTGGGACATGAAACTCAACGAAGTCTACCGTCAATGCAAGAGTTACCCTGGAAGATTGTCTAGGATTTATCAAGAGAATGATATGCTTCCACTCCGTACTTCAGAGCTTATGCTTCCATCACTACCTGATATAGATAAATTTGTCCCAGGTCAGAGTGGGAATATGATGCTACGCTTGCCCATGCCAAATTCTTTGTCGTCTTTGCAACCAAAGTCCAGATTCGTCTATGAGAGCAATGATAATGTGGCTATGCTCCCTAAGCCTCCCATGGAGATCACTACACAAGAGGAAGTTGATTCAAACAGGGCAAATGAATGGTCAATACCATTACCTCTTTTATTGTTTACTGTCTTTCTTGGTTTTTGTATTATTATCTATCACTCTCAAGTGGTCACAGATAAAGACCAAGACAGGGAGTTACATTCAAAAAATTCACCTCTTAAGAAGAAGAAAACACGCAAGTCAGTCAAGAACAACTTCGTCGTTGACAAACAGGATAAGCCAACATCATCAACTGAGGAGGACCTTGTGACACATAAGGAAACAAACACTGTTACACGGTTGCAAGTTGATGGACGCAGGATTGGTAAACTATTTGTATCAATTAAAGAAATTGCTAAGGGAAGCAATGGTACCATTGTGCTTGAGGGGACATACGAAGGCCGAGCAGTCGCTGTCAAACGTCTTGTCCAGTCTCATCATGACGTAGCCCATAAAGAAATCCAAAATCTCATTGCATCTGACAGACATACAAACATTGTTCGATGGCATGGGGTGGAATGTGATCATGATTTTGTTTACCTTGCTTTGGAACGTTGCACATGCAATTTGGATGATTTGATTCACATGTACTCTGATATATCAGAAAACCCAGCAATTAAAAAGGTTCAAATGGAGACAGAGATGAATGATATGCAGTGTCTTTGGAAAGAAAACGGCTTTCCATCACCTCTATTATTGAAACTGATGAGGGATATAATTTCTGGGCTTGTTCATTTGCATGAACTAGGAATAATACATCGGGATTTGAAACCTCAAAATGTTTTGATAACAAAAGAAAGATCATTTTGTGCAAAACTTTCTGATATGGGAATTAGCAAACGCCTTCTTGAAGATATGTCTTCTCTGGATCATAACGTTACTGGCTGTGGCAGTTCAGGGTGGCAAGCACCGGAGCAACTTGTTCGAGGACGTCAAACACGAGCTGTGGATTTATTTAGTTTAGGTTGTGTCCTCTTTTTCTGCATGACTGCAGGAAGACATCCATTTGGAGAACGTCTTGAGCGTGATGTCAATATTCTGAAAAATCAAAAGGATCTTTTCTTAGTGGAGTTTATTCCTGAAGCCGAGGATCTTATTTCTTGTTTGTTAAACCCTAACCCTGATCTTAGGCCAATGGCGATTGAAGTATTGCACCATCCTCTTTTTTGGAGCTCTGAGATGAGACTTTCATTTCTTCGTGACGTAAGTGACAGGGTGGAACTTGAAGATAGAGAATTTGTTTCTGATCTTTTAAAGGCACTAGAAAGCATTGCTCCACTGGCTTTAGGTGCTAAATGGGATGAGAAGCTAGATCCTGATTTCATCACTAACATTGGTCGATACCGGAGATATAAATATGACAGTGTTCGAGACTTGTTAAGGGTCATGAGAAATAAGCTAAATCATTACAGGGAATTGCCTCAAGAAATCCAGGAACTGATAGGACCTGTTCCGGAAGGATTCAATGACTACTTTGCAAGTCGATTCCCAAGACTCTTGATTGAAGTGTACAGAGTTATATACAAAAATTGCAAGGATGATGAATGTTTTCAAAGATATTTTAGATTCATTAACTAG 2631 0.4071 MKFRVSTSLLSLILVFFFSLSFTSHQSQVPVLSLPPPDTVKLKPATTLIAGLDGTMYLVDSISGRVIWSFSTGSPIYHSYRASNINNPNDKDGNFTGLIECGDDWELILHDPHFGQTILSESIAEFVASTPTMTKEGASIDGTKRSTTFEVDAVTGGLVRILTDSYPYEYDDDQQRLITIKNNELVDPAQLNAPKFLLKIFRTDYFLQSVGPGSGLVLWTMKVAEFKAVLFCQHNDNPSGTTSFDAEDAYVLDGGLDFAMPYACWDMKLNEVYRQCKSYPGRLSRIYQENDMLPLRTSELMLPSLPDIDKFVPGQSGNMMLRLPMPNSLSSLQPKSRFVYESNDNVAMLPKPPMEITTQEEVDSNRANEWSIPLPLLLFTVFLGFCIIIYHSQVVTDKDQDRELHSKNSPLKKKKTRKSVKNNFVVDKQDKPTSSTEEDLVTHKETNTVTRLQVDGRRIGKLFVSIKEIAKGSNGTIVLEGTYEGRAVAVKRLVQSHHDVAHKEIQNLIASDRHTNIVRWHGVECDHDFVYLALERCTCNLDDLIHMYSDISENPAIKKVQMETEMNDMQCLWKENGFPSPLLLKLMRDIISGLVHLHELGIIHRDLKPQNVLITKERSFCAKLSDMGISKRLLEDMSSLDHNVTGCGSSGWQAPEQLVRGRQTRAVDLFSLGCVLFFCMTAGRHPFGERLERDVNILKNQKDLFLVEFIPEAEDLISCLLNPNPDLRPMAIEVLHHPLFWSSEMRLSFLRDVSDRVELEDREFVSDLLKALESIAPLALGAKWDEKLDPDFITNIGRYRRYKYDSVRDLLRVMRNKLNHYRELPQEIQELIGPVPEGFNDYFASRFPRLLIEVYRVIYKNCKDDECFQRYFRFIN 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1112 876 SUPERFAMILY Protein kinase-like (PK-like) 455 758 IPR011009 -
Aed11g1112 876 Gene3D Phosphorylase Kinase; domain 1 448 535 - -
Aed11g1112 876 SMART serkin_6 463 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1112 876 ProSiteProfiles KEN domain profile. 743 874 IPR010513 GO:0004540|GO:0006397
Aed11g1112 876 CDD RNase_Ire1 744 872 - -
Aed11g1112 876 MobiDBLite consensus disorder prediction 399 439 - -
Aed11g1112 876 Pfam Protein kinase domain 464 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1112 876 Gene3D Transferase(Phosphotransferase) domain 1 562 742 - -
Aed11g1112 876 PANTHER IRE1-RELATED 27 872 IPR045133 GO:0004521|GO:0004674|GO:0030968
Aed11g1112 876 ProSitePatterns Serine/Threonine protein kinases active-site signature. 602 614 IPR008271 GO:0004672|GO:0006468
Aed11g1112 876 ProSiteProfiles Protein kinase domain profile. 463 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1112 876 Gene3D KEN domain 743 875 IPR038357 -
Aed11g1112 876 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 27 872 - -
Aed11g1112 876 MobiDBLite consensus disorder prediction 420 439 - -
Aed11g1112 876 Pfam Ribonuclease 2-5A 746 872 IPR010513 GO:0004540|GO:0006397
Aed11g1112 876 SMART PGNneu 805 859 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1112 Aed-Chr11 16700275 16712075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1112 489 739 MAP Kinase Kinase Kinase AT3G06030 26.275 2.95e-19 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Aed11g1112 Pkinase 2.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1112 K08852 - gmx:100785363 1303.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1112 11 16700275 16712075 Aed11g1112 11 16700275 16712075 ECH
Aed11g1112 11 16700275 16712075 Aed7g1303 7 10729754 10739004 ECH
Aed11g1112 11 16700275 16712075 Aed7g1303 7 10729754 10739004 PCT