Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1106 ATGGTCATGGAGGGAAGAATCTGCGAGGAATTACCTCCCAGGTATTATGCCCTTTGTGCCATTGGAGGAATGCTCAGTGCTGGCACCACCCACCTTGCCATCACTCCTTTTGATGTCTTGAAAGTCAACATGCAGGTGCACCCTATTAAGTATTACAGTATTTCCTCTTGCTTTACTACCTTACTGAGGGAACAAGGGCCATCTGTTCTTTGGAAAGGTTGGACCGGCAAGCTCTTTGGCTATGGTGCTCAAGGAGGATGCAGATTTGGTCTCTATGAGTATTTTAAAGGGGTTTATTCTAACGTATTGGCAGACCAGAACAGGAGTTTTGTTTTCTTTCTAAGTAGTGCTTCTGCTGAAGTGTTTGCCAATGTAGCTCTATGTCCATTTGAAGCGGTTAAAGTGAGGGTTCAAGCACACCCCTGTTATGCTAAGGGCTTGTTTGATGGCTTTCCAAAGTTATATGCATCAGAAGGCACACGAGGATTCTACCGTGGACTAGTTCCACTATTGGGTCGAAACATTCCGTCAGTTTCCATGGTTATGTTCTCAACATTTGAGCATTCCGTTGATTTTTTGTATCGAAACGTGGTCAAAAGAAAAAAGGAGGACTGTTCAATAGGTCAACAACTTGGTGTAACATGTTTAGCTGGATATGCAGCTGGATCTGTTGGTAGCTTCATTTCTAATCCTGCTGATAATATTGTATCATCTCTTTATAACAGAAAGGCTGATAGTCTTGCACTGGCTATCAGACATATTGGGCTAGCCAATCTATTTACCAGGAGCCTTCCTATTAGAATGTTGCTAGTTGGTCCTTCTATAACTTTGCAATGGTTTTTTTATGACACCATCAAAGTTTTAGGTGGAATGCCAACTAGTGGTGAAGTTACAACTGACGTGAGAGGAGGAGATGGGGCAGGCTAG 927 0.4293 MVMEGRICEELPPRYYALCAIGGMLSAGTTHLAITPFDVLKVNMQVHPIKYYSISSCFTTLLREQGPSVLWKGWTGKLFGYGAQGGCRFGLYEYFKGVYSNVLADQNRSFVFFLSSASAEVFANVALCPFEAVKVRVQAHPCYAKGLFDGFPKLYASEGTRGFYRGLVPLLGRNIPSVSMVMFSTFEHSVDFLYRNVVKRKKEDCSIGQQLGVTCLAGYAAGSVGSFISNPADNIVSSLYNRKADSLALAIRHIGLANLFTRSLPIRMLLVGPSITLQWFFYDTIKVLGGMPTSGEVTTDVRGGDGAG 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1106 308 Pfam Mitochondrial carrier protein 19 100 IPR018108 -
Aed11g1106 308 Pfam Mitochondrial carrier protein 111 196 IPR018108 -
Aed11g1106 308 ProSiteProfiles Solute carrier (Solcar) repeat profile. 209 288 IPR018108 -
Aed11g1106 308 Gene3D Mitochondrial carrier domain 17 290 IPR023395 -
Aed11g1106 308 PANTHER PHOSPHATE CARRIER PROTEIN 4 302 - -
Aed11g1106 308 SUPERFAMILY Mitochondrial carrier 15 284 IPR023395 -
Aed11g1106 308 ProSiteProfiles Solute carrier (Solcar) repeat profile. 14 98 IPR018108 -
Aed11g1106 308 ProSiteProfiles Solute carrier (Solcar) repeat profile. 107 192 IPR018108 -
Aed11g1106 308 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 4 302 IPR044677 GO:0005315|GO:1990547
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1106 Aed-Chr11 16657475 16660343 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1106 3 301 Chloroplast and Mitochondria Gene Families AT2G17270 65.667 1.99e-149 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1106 K15102 - gmx:100788561 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1106 11 16657475 16660343 Aed11g1106 11 16657475 16660343 ECH