Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1104 ATGAATGGTAAGATGGGACAGCCGAGCGAGGAGATTCCTCCACCGTTCGCTTCAACCACCGCCGGAAGCAATTCTCTGAATCTGGAAGCTATGGAAATCAATGATGATTCGGAAGAGAGATCATCGGAGGATTCGTTTTGGGCATCAGTGGTCGTAGATATATTAAAGAAATTAATACCATATGCTGCAGAGGAAGAGATTTTCATATTGGGAGCTAGCGGTGAAGTATCATACGTTGAACTTGTCAATCCACAAGAAGCTCCCGTAGCAAACACTGTTTTACAAGGAAGTTTCTCGATATCCGCAATCGAGGGTAATATTGTTTGGCCCGGAAACCTTGAGAATAAGAAAAGCCAGGTGAATGTTTTAGTGGCTGGATCTGATGGTCGGATTCGAGGAGGACCTGTGCGAACCTTAATTGCTAAATCTTCTATTAAGGTGTTTGTTAGCACAACAAGTAAAGATGATGTACACGAGATGGTTCCATTGTTCCAATTCCATGAGCACGCTAAACGTATGGCAGACGTAGTGGATCAGATCTATAAGGCTACGTTGAAGGACCTCAATACCCACTGCTGA 579 0.4387 MNGKMGQPSEEIPPPFASTTAGSNSLNLEAMEINDDSEERSSEDSFWASVVVDILKKLIPYAAEEEIFILGASGEVSYVELVNPQEAPVANTVLQGSFSISAIEGNIVWPGNLENKKSQVNVLVAGSDGRIRGGPVRTLIAKSSIKVFVSTTSKDDVHEMVPLFQFHEHAKRMADVVDQIYKATLKDLNTHC 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1104 192 MobiDBLite consensus disorder prediction 1 27 - -
Aed11g1104 192 Pfam Plants and Prokaryotes Conserved (PCC) domain 53 151 IPR005175 -
Aed11g1104 192 MobiDBLite consensus disorder prediction 13 27 - -
Aed11g1104 192 SUPERFAMILY AF0104/ALDC/Ptd012-like 53 152 - -
Aed11g1104 192 Gene3D - 52 168 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1104 49 150 AT-hook Motif Nuclear Localized (AHL) Family AT2G45850 31.776 1.77e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1104 - - pvu:PHAVU_002G118500g 196.052