LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed11g1095	ATGTCTTGTTCCAATTATGCTAGAAGCAGTTGTACCTTCTTTTATCTGTTTCTTGCAGTGCTTGTTGCAAATACTAGCTTTTGCTTCTCTGCCAAGGTTTATGTGGTGTACATGGGAAGCAAAACTGGGGAAGACCCAGTTGATATTCTGAAACACAATCATCAAATGCTTGCATCTGTTCACAGTGGAAGTATTGAGCAAGCCGAAGCTTCCCATGTTTATAGCTATAAACATGCTTTTAGAGGTTTTGCAGCCAAGTTGACTAATGAACAGGCTTACCAAATTTCAAAAATGGCAGGAGTGGTGTCTGTTTTTCCTAACTCTAAAAGAAAGCTGCACACCACTCATTCATGGGACTTCATAGGACTTTTGGACAATGAATCAATGGAGATTCAAGGCCACTCCACTAAAAACCAAGAAAATATAATCATTGGTTTCATTGATACGGGAATTTGGCCTGAATCCCCAAGTTTTAGTGACACCGACATGCCCCCTGTACCCCGGGGATGGAAGGGCCATTGTCAAATAGGAGAAGCATTCAATGCTTCATCATGCAACAGGAAAGTGATAGGAGCAAGATACTACATGAGTGGACATGAAGCAGAAGAAGGGTCAGAGTCAGACAGAAAAGTCTCTTTCAGATCAGCCAGAGATAGCTCAGGTCATGGCAGCCACACAGCATCCACGGCCGCGGGACGCTACGTGGCAAACATGAATTACAAGGGTCTAGCAGCTGGAGCAGCAAGGGGAGGTGCACCTAAGGCTAGAATTGCGGTGTACAAAGTGTGTTGGGACTCAGGTTGCTATGATGTGGACTTGTTAGCAGCATTTGATGATGCAATAAGAGATGGTGTTCACATTATATCTTTGTCTCTGGGTCCTGAATCTCCCCCAGGTGATTATTTCAATGATGCTGTCTCTGTGGCATCATTCCATGCTGCTAGACATGGAGTGCTGGTGGTAGCATCAGTTGGGAATCAAGGATATCCCGGCTCTGCGACGAACGTTGCACCGTGGATTATCACAGTTGCTGCTAGCTCAACTGATAGGGATTTCACCTCTGATATCTCACTAGGAAATGGTGTTAACATCACGGGTGAGAGTCTCGGTCTCTTGGGAATGAATGCCTCTAGAAGATTGATTGATGCATCAGAAGCCTTTGCTGGATACTTTACTCCTTATCAATCCAGTTACTGTGTGGATAGTTCCCTGAATAAGACCAAGGCCAAAGGGAAAGTTCTTGTGTGTCGAAATGCAGAGTTTTCAGCAGAGTCAAAGTTGGAGAAGAGTAAGATAGTGCAAGAGGCAGGTGGTGTTGGGATGATACTCATTGATGAAGCAAATCAAGGTGTTTCCACCCCATTTGTGATACCTTCAGCTGTCGTTGGAACGAAAACCGGAGAACGGATTCTATCCTACATCAATAGCACACGGTTTCCTGATGTTACAGCTCCCGGATTAAACATCCTTGCAGCATGGTCCCCAGCCACAGCAGGAATGAAGTTCAATATTGCATCAGGAACTTCTATGTCTTCAACAATTTTGGATAAGCACCACCAACCCATTAGAGCGGATCCTGATAGAAGAAGGGCTAATGCATTTGATTATGGATCAGGGTTTGTGAACCCCACAAGAGTTCTAGATCCTGGTCTTGTCTATGATTCGCATACAGAAGATTTTGTTGCGTTCCTCTGTTCACTTGGTTATGATGAGAGGTCACTCCGCCTTGTCACAAAAGACAACAGCACATGTGATAAAAGGGCATTCAAAACACCATCTGATCTCAACTATCCATCTATTGCAGTGTCGAATCTTGAAGACAGCTTTTCAGTAACTCGAGTTGTGACTAATGTTGGAAAAGCAAGAAGTATATATAAAGCTGTAGTGGTGTCTCCTGCTGGAGTTAATGTTACTGTTGTGCCAAATCGATTAGTCTTCACAAGAGTAGGACAGAAAATCAAGTTTAGTGTGAATTTCAAAGTGGCTGCTCCCTCAAAGGGCTATGCATTTGGGTTCTTGTCATGGAAGAATGGAATATCACAGGTCACTAGTCCTTTAGTGGTCAGGGTTGCACCACCAAGTCATGGGTTGGTGAGATAA	2100	0.44	MSCSNYARSSCTFFYLFLAVLVANTSFCFSAKVYVVYMGSKTGEDPVDILKHNHQMLASVHSGSIEQAEASHVYSYKHAFRGFAAKLTNEQAYQISKMAGVVSVFPNSKRKLHTTHSWDFIGLLDNESMEIQGHSTKNQENIIIGFIDTGIWPESPSFSDTDMPPVPRGWKGHCQIGEAFNASSCNRKVIGARYYMSGHEAEEGSESDRKVSFRSARDSSGHGSHTASTAAGRYVANMNYKGLAAGAARGGAPKARIAVYKVCWDSGCYDVDLLAAFDDAIRDGVHIISLSLGPESPPGDYFNDAVSVASFHAARHGVLVVASVGNQGYPGSATNVAPWIITVAASSTDRDFTSDISLGNGVNITGESLGLLGMNASRRLIDASEAFAGYFTPYQSSYCVDSSLNKTKAKGKVLVCRNAEFSAESKLEKSKIVQEAGGVGMILIDEANQGVSTPFVIPSAVVGTKTGERILSYINSTRFPDVTAPGLNILAAWSPATAGMKFNIASGTSMSSTILDKHHQPIRADPDRRRANAFDYGSGFVNPTRVLDPGLVYDSHTEDFVAFLCSLGYDERSLRLVTKDNSTCDKRAFKTPSDLNYPSIAVSNLEDSFSVTRVVTNVGKARSIYKAVVVSPAGVNVTVVPNRLVFTRVGQKIKFSVNFKVAAPSKGYAFGFLSWKNGISQVTSPLVVRVAPPSHGLVR	699

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Aed11g1095	699	Pfam	Subtilase family	140	512	IPR000209	GO:0006508\|GO:0008236
Aed11g1095	699	Gene3D	-	349	478	-	-
Aed11g1095	699	Pfam	Peptidase inhibitor I9	33	113	IPR010259	-
Aed11g1095	699	MobiDBLite	consensus disorder prediction	205	228	-	-
Aed11g1095	699	Pfam	Fibronectin type-III domain	594	688	IPR041469	-
Aed11g1095	699	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	512	692	IPR045051	-
Aed11g1095	699	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	21	480	IPR045051	-
Aed11g1095	699	PANTHER	TRIPEPTIDYL-PEPTIDASE II-RELATED	512	692	-	-
Aed11g1095	699	SUPERFAMILY	Subtilisin-like	15	649	IPR036852	GO:0004252\|GO:0006508
Aed11g1095	699	ProSiteProfiles	Serine proteases, subtilase domain profile.	117	547	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed11g1095	Aed-Chr11	16565427	16569612	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed11g1095	13	689	Subtilisin-like Serine Gene Family	AT4G10520	37.288	8.83e-147	444

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed11g1095	-		-	gmx:100780538	1261.13

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed11g1095	11	16565427	16569612	Aed11g1095	11	16565427	16569612	ECH

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