Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1091 ATGACCATTGATGTGCCACCATCCAGTGCCCAAAGTGTGAGGACAAATAGATCTTCCTTTAGTTCTAGCAATGGCAATGAGGCTACCCCAGTGTACAACTATGCATCTGTTAGCAATGGTGATGGCTATGATAGTGATGGCTCCAATTTCGCGCCACCTACACCAACAACTCTTTCAATGGCCATTCCATCAGAACTCGCTGGAGCTGTACCCTTGATTGATAGATTCCAGGTGGAAGGATTCTTGAAATTGATGCATAAACAAATTCAATCTGCTGGAAAACGTGGGTTTTTTTCTAAAAAATCTGTGGGCCCCCAAGTTCGAGAGAAATTTACATTTGAGGACATGCTTTGTTTCCAAAAGGATCCAATACCTATATCATTGCTTAAGCTTAATGGTGACTTGGCAAGCCGAGCAACAAAACTATTTCAAATAATTTTGAAATATATTGGAGTTGATTCATCCGACCATTTAACTCCGATAAGCTTAGAAGAACGAGTTGAGCTTGTTGGTAAACTATACAAGCAAAGTTTGAAGCGTTCTGAACTCCGAGATGAACTTTTTGTCCAGTTATCAAAACAAACGAGAAACAATCCTGAGAGGGAGTACTTGATTAAAGCATGGGAGCTAATGTATTTATGTGCTTCATCCATGCCTCCTAGCAAAGACATTGGAGCATATCTATCAGAATATATTCATAATGTGGCATATGGTGTAACTGCTGATCCTGAGATCCGAGCCCTTGCATTAAATACGTTAAATGCTTTGAAGCACTCTGTCAAGGCTGGTCCTAGACATACAATACCTGGGCCTGTCGAGATTGAAGCTCTGTTGACAGGGAAAAAACTTACAACTATAGTGTTCTTCCTGGATGAAACATTTGAAGAAATTACCTATGACATGTCAACAACAGTCGCTGATGCTGTCGAGGAACTTGCAGGGATCATTAAACTGTCAACATACTCTAGTTTTGGCATGTTCGAATGTCAGGAGTACATTGGGTTAGACGACAATAAATATATTGGGGATCTCCTGGCGGAGTTTAAGGCAGTGAAGGATCGAAGTAAGGGAGAAATATTGCACTGTAAACTAATATTCAAGAAGAAGTTATTTCGTGAATCAGATGAAGCTGTGACAGATCCAATGTTTTTGCAGTTGTCCTATGTACAATTGCAGCACGATTATATTTTGGGTAATTATCCTATTGGAAGGGATGATGCTGCCCAGCTTTCTGCATTGCAAATCTTGGCTGAGATTGGATTTGTCAGAAGACCTGAATCATGCGCTGACTGGAATTCATTTCTGGAGCGATTTCTACCTAGACAAATAGCTATGACTCGAGCAAGACGGGAATGGGAGTTGGACATTCTTTCTTGTTATCATTCACTGGCGCATGTGACAAAAGATGATGCAAGACAGCAATTTCTGCATATATTGAGAACACTTCCCTATGGGTTTTCTGTTTTCTTCAATGTTCGCAAAATTGATGATCCTATTGGACTATTGCCTGGACGAATAATATTGGGAATCAACAAGAGAGGGGTCCATTTTTTCCGTCCTGTTCCAAAGGAATATATGCACTCTGCTGAGTTGAGAGACATAATGCAATTCGGAAGCAGCAATACTGCAGTATTTTTTAAAATGCGTGTTGCAGGTGTTCTTCACATATTCCAGTTTGAAACAAAGCAGGGAGAAGAAATTTGTGTAGCTCTTCAGACACACATAAATGATGTAATGCTGCGCCGCTATTCCAAAGCTCGATCTGCTGTGGGTGGTTCTTTGGATGAAGACATTTCTAATAATTTTAAGCCTTCTAATTTGGAACTAAATGAAAAACGTGCTAAAATTCTAGAGAAAAGAAACATGGAAGCAAAGATGGCCGAGTTGAGTAATCTGGTTACAGAGAACACTACCAAAAAGGACCCCATTCAAGCAAATAACCAAGTGTCACAAAAACTCGAAGATGACCTAAAACTATGTAAAGGTGAACTGTGTTTAGCTGAAGAGACTATCAAAAGCTTGAGAAGTGATAAGTTGATTTTGGAACAGAAGCTATCTGAACTTGAGAAGAAGAATGCTGAAGAGGTTAGTTCTCTTCAATGGAAACTTGAGCAAGAACGCAAAACTCTGAACTCTAAAGCATATGACCTTGAACGAAAATTGGATGTGTTTAGACAAGAATTAACTGTGGCTGAGTCTACACTCTCGGTCAAGGACTCTGAATTGGCTGTATTGAAGAACAATTTAGATGAACTAGAAGAATTGAGAGAAATGAAAGAGGACATTGATAGAAAGAATGCGCAAACAGCTGCCATACTGAAAATGCAAGCAGCTCAACTAGCTGAAATGGAATTTCTTTATAAGGAAGAGCAGGTTCTCAGAAAGCGATATTTTAATACCATAGAAGATATGAAAGGCAAGATAAGAGTTTATTGTCGGTTAAGACCTCTTATTGAAAAAGAGATTGCAAGCAGAGAAAGAGATTCTCTTACTACTGTAGATGAGTTTACAGTTGAGCATCCATGGAAAGATGATAAATCAAAACAGCACATATATGACCGTGTGTTTGATGGTGATGCCACTCAAGAAGATTACTTGGTGCAATCTGCTGTAGATGGTTATAATGTGTGTATATTTGCTTACGGTCAAACTGGTTCTGGAAAGACTTTTACAATCTATGGAGCTGAAAACAATCCCGGGCTTACCCCTCGTGCTACTGCAGAACTTTTTAGAATTTTAAGGAGAGATAGTAACAAGTATTCTTTTTCGTTGAAGGCATATATGTTGGAATTATATCAAGATACACTTGTAGATCTTCTGTTGCCGAAGAATGCAAAGCGTTTAAAATTGGATATTAAGAAGGATTCCAAGGGAATGGTAGCAGTAGAAAACGTAACAATTGTGCCGATTTCTACTATGGAGGAATTAAATAGCATAATGCAGAGGGGTTCTGAGCAGCGGCATACATCAGGGACACAAATGAATGACGAAAGTTCAAGATCTCATCTCATATTATCAATTGTCATTGAAAGTACCAACCTTCAAAGCCAATCAACTGCAAGGGGAAAGTTAAGTTTTGTGGATCTGGCTGGGTCAGAAAGAGTAAAAAAGTCGGGCTCTTCAGGTAGTCAACTTAAAGAAGCTCAAAGTATCAACAAATCATTATCAGCGCTAGGAGATGTTATTAGTGCTTTGTCTTCTGGTGGTCAACACATACCTTACAGAAATCACAAGTTAACTATGTTGATGAGTGATTCCCTTGGGGGTAATGCCAAAACCCTCATGTTTGTGAATGTATCTCCGGTGGAATCAAGCTTGGATGAGACGCATAACTCTCTAATGTATGCATCACGAGTGAGATCAATTGTGAATGATCCAAGCAAGAATGTATCTTCTAAAGAGATAGCTCGATTGAAGAAATTGGTAGCATATTGGAAGGAACAGGCAGGTAGGAGAGGAGAGGATGAAGATTTGGAAGAAATCCAAGAAGAAAGACCAACTAAAGAGAGGAGTGATGGCCGGCATTCTATGTAG 3534 0.3939 MTIDVPPSSAQSVRTNRSSFSSSNGNEATPVYNYASVSNGDGYDSDGSNFAPPTPTTLSMAIPSELAGAVPLIDRFQVEGFLKLMHKQIQSAGKRGFFSKKSVGPQVREKFTFEDMLCFQKDPIPISLLKLNGDLASRATKLFQIILKYIGVDSSDHLTPISLEERVELVGKLYKQSLKRSELRDELFVQLSKQTRNNPEREYLIKAWELMYLCASSMPPSKDIGAYLSEYIHNVAYGVTADPEIRALALNTLNALKHSVKAGPRHTIPGPVEIEALLTGKKLTTIVFFLDETFEEITYDMSTTVADAVEELAGIIKLSTYSSFGMFECQEYIGLDDNKYIGDLLAEFKAVKDRSKGEILHCKLIFKKKLFRESDEAVTDPMFLQLSYVQLQHDYILGNYPIGRDDAAQLSALQILAEIGFVRRPESCADWNSFLERFLPRQIAMTRARREWELDILSCYHSLAHVTKDDARQQFLHILRTLPYGFSVFFNVRKIDDPIGLLPGRIILGINKRGVHFFRPVPKEYMHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSAVGGSLDEDISNNFKPSNLELNEKRAKILEKRNMEAKMAELSNLVTENTTKKDPIQANNQVSQKLEDDLKLCKGELCLAEETIKSLRSDKLILEQKLSELEKKNAEEVSSLQWKLEQERKTLNSKAYDLERKLDVFRQELTVAESTLSVKDSELAVLKNNLDELEELREMKEDIDRKNAQTAAILKMQAAQLAEMEFLYKEEQVLRKRYFNTIEDMKGKIRVYCRLRPLIEKEIASRERDSLTTVDEFTVEHPWKDDKSKQHIYDRVFDGDATQEDYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGAENNPGLTPRATAELFRILRRDSNKYSFSLKAYMLELYQDTLVDLLLPKNAKRLKLDIKKDSKGMVAVENVTIVPISTMEELNSIMQRGSEQRHTSGTQMNDESSRSHLILSIVIESTNLQSQSTARGKLSFVDLAGSERVKKSGSSGSQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPVESSLDETHNSLMYASRVRSIVNDPSKNVSSKEIARLKKLVAYWKEQAGRRGEDEDLEEIQEERPTKERSDGRHSM 1177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1091 1177 Gene3D - 282 372 - -
Aed11g1091 1177 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 807 1150 IPR027417 -
Aed11g1091 1177 Gene3D - 1125 1173 - -
Aed11g1091 1177 ProSiteProfiles MyTH4 domain profile. 119 278 IPR000857 GO:0005856
Aed11g1091 1177 CDD FERM_C_KCBP 487 592 - -
Aed11g1091 1177 Gene3D MyTH4 domain 97 279 IPR038185 -
Aed11g1091 1177 CDD FERM_B-lobe 384 482 IPR019748 -
Aed11g1091 1177 PRINTS Kinesin heavy chain signature 1072 1093 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed11g1091 1177 PRINTS Kinesin heavy chain signature 992 1009 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed11g1091 1177 PRINTS Kinesin heavy chain signature 873 894 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed11g1091 1177 PRINTS Kinesin heavy chain signature 1023 1041 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed11g1091 1177 PANTHER KINESIN-LIKE CALMODULIN-BINDING PROTEIN 540 1173 - -
Aed11g1091 1177 CDD KISc_C_terminal 805 1124 - -
Aed11g1091 1177 ProSiteProfiles FERM domain profile. 283 583 IPR000299 GO:0005856
Aed11g1091 1177 PANTHER KINESIN-RELATED 540 1173 IPR027640 GO:0003777|GO:0007018
Aed11g1091 1177 Coils Coil 671 691 - -
Aed11g1091 1177 MobiDBLite consensus disorder prediction 1148 1177 - -
Aed11g1091 1177 Pfam MyTH4 domain 172 276 IPR000857 GO:0005856
Aed11g1091 1177 Gene3D - 487 593 IPR011993 -
Aed11g1091 1177 Gene3D - 381 482 IPR014352 -
Aed11g1091 1177 MobiDBLite consensus disorder prediction 1 25 - -
Aed11g1091 1177 ProSitePatterns Kinesin motor domain signature. 1022 1033 IPR019821 GO:0003777|GO:0005524|GO:0007018
Aed11g1091 1177 SMART MyTH4_1 119 278 IPR000857 GO:0005856
Aed11g1091 1177 SUPERFAMILY Prismane protein-like 749 811 IPR011254 GO:0003824|GO:0016491
Aed11g1091 1177 SUPERFAMILY PH domain-like 489 577 - -
Aed11g1091 1177 Pfam Kinesin motor domain 813 1122 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed11g1091 1177 ProSiteProfiles Kinesin motor domain profile. 807 1122 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed11g1091 1177 Coils Coil 707 727 - -
Aed11g1091 1177 Gene3D Kinesin motor domain 794 1124 IPR036961 -
Aed11g1091 1177 SUPERFAMILY Second domain of FERM 367 484 IPR035963 -
Aed11g1091 1177 SMART B41_5 279 489 IPR019749 -
Aed11g1091 1177 Pfam FERM central domain 375 489 IPR019748 -
Aed11g1091 1177 SMART kinesin_4 805 1130 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed11g1091 1177 Coils Coil 735 768 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1091 Aed-Chr11 16544447 16553159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1091 28 1172 Calmodulin-binding Proteins AT5G65930 68.670 0.0 1690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1091 - - gmx:100782701 1895.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1091 11 16544447 16553159 Aed11g1091 11 16544447 16553159 ECH