Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1086 ATGGCAGCAGTGGGAGTGGGAGGTGAGATATGGAAGGCACATGTGGCGATGGCGGCGGTGCAGGTATTCAATGGAGGTTACCATGTCATCACCAAAGTCGCCCTTAATGTTGGCATCAACCAATTAGTCTTCTGTGTCTTCCGCGATCTCCTTGCACTTTCCATTCTCGCTCCCCTTGCTTATGTCCGTGAAAAACGGATTCGACCACCCATTACCAGGAACCTCCTGATGTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCAGCTTTTGTTTCTTATTGGTTTAAGCTATACCAATCCAACTTATGCAGCTGCTATACAGCCATCCATTCCAGTCTTTACCTTTCTGTTGGCTGTAATGATGGGTACAGAAAGAGTGGACTTGCTCAGATATGATGGTCTGGCAAAAGTTGGAGGAACTATTATCTGTGTTTCTGGTGCCATATTGATGGTTTTGTATCGTGGTCCAGCGTTGATAGGATATGCTGAATTCAATCATGTAACACAAAATGAAATAAGTGCCAGAGGTCAGCCAGAGCCACCTGGACGGTTAATTGGTGGTTTACTGGGCCTTGGTTTAGACCATTTTCATCTTGGAGTTCTGTGCTTGATAGGGAACTGCATTTGCATGGCTGCATTTTTAGCCATTCAGGCACCAGTATTAAAAAAATATCCTGCAAACCTATCTGTTACAGCATCTTCATACTTCTTTGGAGCTTTACTGATGGTGACAGTGTCATTATTAATGACTAATGAGTCAACTGCCTGGAGTTTGACGTCATCAGAAATACTTGCTGTTATTTATGCTGGAACTATTGCATCTGCCCTGAACTATGGACTCATTACATGGTGCAACAAGATCATAGGGCCAGCCATGGTTTCCCTTTACAATCCACTCCAACCTGCGTTTTCTGCCATCCTGTCCCAAATTTTTCTTGGAAGTCCAATTTACTTGGGAAGCATCATAGGGGGTTCTTTTATCATTGCCGGTCTATATATGGTTACTTGGGCATCTTATAGAGAAAGACAAGGAACTCTTGGAGTTACTCCTCATAGCTCTTGGGTCTCTGAACCACTTATTCATGACAAAAGTGCACACCAGAGAGGTCTCGTTTTTTCGGTCTCTGTATCCCCAAAGTCATCATCAGATTAA 1161 0.435 MAAVGVGGEIWKAHVAMAAVQVFNGGYHVITKVALNVGINQLVFCVFRDLLALSILAPLAYVREKRIRPPITRNLLMSFFFLGLTGIFGNQLLFLIGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVDLLRYDGLAKVGGTIICVSGAILMVLYRGPALIGYAEFNHVTQNEISARGQPEPPGRLIGGLLGLGLDHFHLGVLCLIGNCICMAAFLAIQAPVLKKYPANLSVTASSYFFGALLMVTVSLLMTNESTAWSLTSSEILAVIYAGTIASALNYGLITWCNKIIGPAMVSLYNPLQPAFSAILSQIFLGSPIYLGSIIGGSFIIAGLYMVTWASYRERQGTLGVTPHSSWVSEPLIHDKSAHQRGLVFSVSVSPKSSSD 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1086 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 343 - -
Aed11g1086 386 PANTHER WAT1-RELATED PROTEIN 12 379 IPR030184 GO:0016021|GO:0022857
Aed11g1086 386 Pfam EamA-like transporter family 15 154 IPR000620 GO:0016020|GO:0016021
Aed11g1086 386 Pfam EamA-like transporter family 201 338 IPR000620 GO:0016020|GO:0016021
Aed11g1086 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 155 - -
Aed11g1086 386 PANTHER WAT1-RELATED PROTEIN 12 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1086 Aed-Chr11 16513102 16516500 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1086 6 272 Nodulin-like Gene Family AT3G45870 70.787 1.33e-126 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1086 - - gmx:100787738 642.884