Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1085 ATGGTTATGGCAGCGGCATCAATGAGGGGTGGTGAAACATGGAAGGCCCATGTGAGCATGGCACTGGCCCAGTTATTCTACGGAGGCTACACTGTAATCACTAAAGTGGCCCTCAATGTTGGGATCAACCAACTAGTTTTCTGCTTGTACCGGAATCTCCTTGCCTTCATTATTCTTGCTCCTCTCGCTTTTTTTATTGAAAGGCATGCTCTTTTTTCCCTCCCTAAATCAAATGATTTTGTAGTTTGCAGACGGACTAGACCACCCATTACCAAAAAACTACTGATGTCATTCTTCTTTCTTGGATTGACTGGGATATTTGGCAACCAGCTCTTGTTTCTCATTGGTTTAAATTATACTAATCCAACTTATGCTGCTGCTGCACAGCCAGCCATTCCAGTCTTTACATTTCTGTTAACTCTAATAATGGGTATAGAAAGAGTGAACTTGCTCAGATATGAAGGACTGGCAAAGGTTGGAGGAACTCTTATCTGTGTTTCTGGTGCCGTGCTGATGGTTTTGTATCGTGGTCCCGCTTTGATAGGAGATAAAGAAATGGACCATGTTCTACAAATCAACAATAGTTTACTGGATCTTAGATTTGACCATTTTCAGCTTGGGGTTATGTTCTTGATAGGCAACTGCTGCTGCATGACTTCTTTTCTAGCTATTCAGGCACCATTATTAAAAATGTATCCTGCAAATCTATCTGTTACAGCATATTCATTCTTCTTTGGAGTTGTACTGACACTGGTTGCATCATTGTTCATGGTTAATGAGCCAACTGACTGGATTTTGAAGCAATCAGAAATACTAGCCGTTGGAACTATTACATCTGCACTTAACTATGGACTTGTTATATGGAGCAATAAGATCTTGGGGCCAGCTTTGGTTTCCCTTTACTATCCTCTTCAACCTGCATTTTCTGCCCTTCTGTCCCAAATTTTCCTTGGCTCTCCAATTTACTTGGGAAGGTATAACTCCTAA 987 0.4113 MVMAAASMRGGETWKAHVSMALAQLFYGGYTVITKVALNVGINQLVFCLYRNLLAFIILAPLAFFIERHALFSLPKSNDFVVCRRTRPPITKKLLMSFFFLGLTGIFGNQLLFLIGLNYTNPTYAAAAQPAIPVFTFLLTLIMGIERVNLLRYEGLAKVGGTLICVSGAVLMVLYRGPALIGDKEMDHVLQINNSLLDLRFDHFQLGVMFLIGNCCCMTSFLAIQAPLLKMYPANLSVTAYSFFFGVVLTLVASLFMVNEPTDWILKQSEILAVGTITSALNYGLVIWSNKILGPALVSLYYPLQPAFSALLSQIFLGSPIYLGRYNS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1085 328 Pfam EamA-like transporter family 206 323 IPR000620 GO:0016020|GO:0016021
Aed11g1085 328 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020|GO:0016021
Aed11g1085 328 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 175 - -
Aed11g1085 328 PANTHER NODULIN MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN 15 324 - -
Aed11g1085 328 PANTHER WAT1-RELATED PROTEIN 15 324 IPR030184 GO:0016021|GO:0022857
Aed11g1085 328 SUPERFAMILY Multidrug resistance efflux transporter EmrE 271 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1085 Aed-Chr11 16509221 16511866 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1085 12 274 Nodulin-like Gene Family AT3G45870 58.974 2.27e-101 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1085 - - gmx:100793192 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1085 11 16509221 16511866 Aed11g1085 11 16509221 16511866 ECH