Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1084 ATGGCAGAAGAAGGTTCTGAATCAGTGGCGTGGAAGGCTCATGTGGGCATGGCACTGGCGCAGCTATTCTATGGTGGCTACCATGTAATCACCAAAGTGGCACTCAATGTTGGGGTCAACCAACTTGTTTTCTGCTTCTACAGGGATTTCACTAGACCGCCCATTACCAAGAAGCTACTCATGTCATTCTTCTTTCTTGGATTGACTGGGATATTTGGCAACCAGCTTTTGTTTCTTATTGGTTTAAGTTATACTAATCCAACTTATGCTGCTGCTGTACAGCCAGCCATTCCAGTCTTTACATTTATGTTTACTGTGATGATGGGCATAGAAAAAGTGAACTTGCGCAGATATGAAGGCGTGGCAAAGGTTGGAGGAACTCTTATCTGTGTTTCGGGTGCCATATTGATGGTTTTCTATCGCGGTCCAGCTTTGATAGGAGATACAGAAATGGACCAGGTTGCACAAATTAAAATAAGTGCCAGAGGCCAGACAGAGCCTTCTGGATGGTTAACCAATGGTTTACCGGATCTCGGATTTGACAATTTTCAGATTGGGGTTATGTTCTTGATAGGGAATTGCATCTGCATGGCTGCTTTTCTAGCCATTCAGGCACCAGTATTAAAAAAGTATCCTGCAAATCTATCTGTCACAGCGTATTCATTCTTCTTTGGAGTTGTGCTGATGGTGATTGCATCAACATTCATGGTTAACGAGTTGACTGACTGGATTTTGACACAATCAGAAATACTAGCCGTTGTATATGCTGGAACTATTGCATCTGCCCTTAACTATGGAATCATTACATGGAGCAATAAGATCTTGGGGCCATCTTTGGTTGCCCTTTACAATCCTCTTCAACCTTTATTTTCTGCCTTACTGTCCCAAATTTTCCTTGGCACTCCAATTTACTTGGGAAGCATCATAGGTGGATCTTTAATCGTTGCCGGTCTATATATGGTTACTTGGGCATCTTATAGAGAAAGACAAGCAATTCTTGGAGTTACTCCTCTTAATGGCTCTTGTGTCTCTGAACCACTTATTCAGGAAAAAACTGCATATCAGAATTCGGGGTCCTCCAGCATATCCTCAAACCCAAAGTCATCAGATTAA 1113 0.4232 MAEEGSESVAWKAHVGMALAQLFYGGYHVITKVALNVGVNQLVFCFYRDFTRPPITKKLLMSFFFLGLTGIFGNQLLFLIGLSYTNPTYAAAVQPAIPVFTFMFTVMMGIEKVNLRRYEGVAKVGGTLICVSGAILMVFYRGPALIGDTEMDQVAQIKISARGQTEPSGWLTNGLPDLGFDNFQIGVMFLIGNCICMAAFLAIQAPVLKKYPANLSVTAYSFFFGVVLMVIASTFMVNELTDWILTQSEILAVVYAGTIASALNYGIITWSNKILGPSLVALYNPLQPLFSALLSQIFLGTPIYLGSIIGGSLIVAGLYMVTWASYRERQAILGVTPLNGSCVSEPLIQEKTAYQNSGSSSISSNPKSSD 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1084 370 Pfam EamA-like transporter family 185 322 IPR000620 GO:0016020|GO:0016021
Aed11g1084 370 Pfam EamA-like transporter family 42 122 IPR000620 GO:0016020|GO:0016021
Aed11g1084 370 PANTHER NODULIN MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN 12 358 - -
Aed11g1084 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 139 - -
Aed11g1084 370 PANTHER WAT1-RELATED PROTEIN 12 358 IPR030184 GO:0016021|GO:0022857
Aed11g1084 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 221 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1084 Aed-Chr11 16504684 16508121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1084 80 348 Nodulin-like Gene Family AT5G45370 62.132 4.17e-118 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1084 - - gmx:100793730 600.127