Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1060 ATGATGTCACGAACAGCGAGTACTATTTCCGTGGTGCATGGTGAGGCTGAATTGGTGGTGCCAGCAGGACCAACTCCACGAGAACTAAAGAACCTCTCCGACATAGATGACCAAGAAGGGTTGCGTTTTCATCATCGTGTAATAATGTTCTATCGAAAAAAGAGTACTCGTGTTATAGAATCAGGATATAAACAGAAAGACGCGGCGGCTATGGTTATAAGAGATGGTTTGGCTAAGGCGCTGGTTCACTACTACCCTTTAGCCGGTAGGTTGATAGAAGGGCCTAACAGAAAGCTTACGGTGGATTGCAGCGGTGAGGGCATCTTGTTCGTTGAAGCTGAGGCTGATGTTTCTCTGAAGGAGCTAGGGAGTTCGATTCTGCCACCATGCCCTTACATGAAGCAACTCCTTCTTGATGTTCCTGGATCACAAGACATTCTCGGATGCCCCCTGCTGTTGCTTCAGGTAACTCGTCTAACATGTGGTGGATTTGTTTTGGCCGCACGTATGAACCACACAATCTGCGACTCACTTGGTCTGGTCCAATTTCTCACCATGGTGGGTGAGATTGCAAGAGGTGCTCCTATATCACAGTTCCCTGTATGGCAAAGACAACTATTCAGTGCAAGAGACCCACCAAGAATCACTTGTGCACACCACGAATATCATGAAACCAAACAATATTGCAACAATGAAAAAACAATGGACTTCGACCAAATGGCCCACGAGTCATTTTTCTTCGGTCCCAAAGAGATTGCAACTCTTAGGAATCACTTTCCTCAGCACCTAAGAAAATGTTCAACTTTTGAGATACTCTCTGCTTGCTTGTGGAAATGTCGCACCATAGCACTTGGGCTGGAGCCCAATGAGATAGTGGGCTTGTCACCCTTTATCACTGCCCGAGGAAAAGTGGGCCTACAAGTGCCCAATGGGTACTACGGCAATGCCTTTGCCTTTCCAATGGCGCTTTCCAAGGCTGGGCTTTTGTGCCAAAGCCCATTGGAGTATGCATTGGGCTTGATTAAAAAGGCAAAGGCCCAAATGGGTGTAGAGTACTTGAATTCTGTGGCGGATCTTATGGTTCTGAAGGGTCGGCCCATGTATAGGACCAAAGGGAACTACCTTATTGGGGACACTACTCATGTGGGGTTCTATGATGTGGATTTTGGGTGGGGGAGTCCTATCTATGGAGGGCCTGCAGGGGCTATACCTTTTGTTAGCTTCTATGGAAGGTTTATAAATAGTGAAGGTGAGGATGGAGTTGTGGTTCCAATTTTGTTGCCACACAATGTTATGAAGAGGTTTCTCTCTGAGCTGGTGAAGATCACAACTCAGGACCCACCTTTGGATCTGTCTTATAAAAAAAACACAAATAGATCCATGTTGTAA 1389 0.4629 MMSRTASTISVVHGEAELVVPAGPTPRELKNLSDIDDQEGLRFHHRVIMFYRKKSTRVIESGYKQKDAAAMVIRDGLAKALVHYYPLAGRLIEGPNRKLTVDCSGEGILFVEAEADVSLKELGSSILPPCPYMKQLLLDVPGSQDILGCPLLLLQVTRLTCGGFVLAARMNHTICDSLGLVQFLTMVGEIARGAPISQFPVWQRQLFSARDPPRITCAHHEYHETKQYCNNEKTMDFDQMAHESFFFGPKEIATLRNHFPQHLRKCSTFEILSACLWKCRTIALGLEPNEIVGLSPFITARGKVGLQVPNGYYGNAFAFPMALSKAGLLCQSPLEYALGLIKKAKAQMGVEYLNSVADLMVLKGRPMYRTKGNYLIGDTTHVGFYDVDFGWGSPIYGGPAGAIPFVSFYGRFINSEGEDGVVVPILLPHNVMKRFLSELVKITTQDPPLDLSYKKNTNRSML 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1060 462 Gene3D - 221 437 IPR023213 -
Aed11g1060 462 Gene3D - 11 220 IPR023213 -
Aed11g1060 462 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 443 - -
Aed11g1060 462 Pfam Transferase family 15 438 - -
Aed11g1060 462 PANTHER LOW QUALITY PROTEIN: METHANOL O-ANTHRANILOYLTRANSFERASE-LIKE 9 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1060 Aed-Chr11 16311860 16313248 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1060 15 442 Monolignol Biosynthesis Gene Families AT5G48930 29.054 5.71e-46 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1060 - - gmx:100817429 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1060 11 16311860 16313248 Aed11g1060 11 16311860 16313248 ECH