Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1057 ATGAAGAGCATAAACGATGACGCTTCAACACAAGATCTTGATCCTCAGAGCGATCACAGCTCCGATTACTTAGCTCAACCTAACTCTCACCCCCAACCACATCCTCAGCCCCGCCGTCCGCGGGGTTTCGCGGCGGCGGCGGCGGCCACCACCACCAATTCCGCCGGCAAGGGGAAGAAGGAGAGAGAGAAGGAGAAGGAGCGCACGAAGCTCCGCGAGCGACACCGCCGTGCCATCACCAGCCGCATGCTCGCCGGACTCCGCCAGTACGGGAATTTCCCCCTGCCGGCGCGTGCCGACATGAACGACGTACTCGCCGCGCTCGCCCGTGAGGCTGGCTGGGTCGTCGACGCCGACGGCACCACCTACCGCCAGTGCCCCGCTCCTTCTCACATGGGGTCATTTGCGGCTAGGTCTGTTGAAAGTCAACTCTCTGGTGGTTCAGGTTCTTTGAGGAATTGTTCTGTTAAGGAAACGATTGAGAATCAGACATCTGTGCTTAGAATTGATGAATGCCTGTCGCCTGCATCCATTGATTCTGTTGTAATTGCAGAAAGGGACTCGAAGAATGAGAAGTATACAAATGCTAGCCCCATCAATACAGTTGACTGCTTGGAGGCTGATCAGCTTATGCAAGATATTCATTCTGGGGTGCATGAAAATGACTTTACTGGCACGCCATACGTTCCTGTTTATGTAAAGCTTCCAGCTGGTATTATTAACAAATTTTGCCAGTTGATTGATCCTGAAGGCATAAAGCAGGAGCTCATTCATATCAAGTCTTTAAATGTAGATGGTGTTGTTGTGGATTGTTGGTGGGGCATTGTTGAAGGCTGGAGCTCACAGAAATATGTGTGGTCTGGTTACAGGGAGCTTTTTAACATTATTAGAGAATTCAAACTGAAGTTACAGGTTGTTATGGCATTTCATGAATGTGGAGGGAATGATTCTAGTGATGCATTGATTTCCCTCCCACAATGGGTTTTGGATATTGGAAAAGACAACCAAGATATATTCTTCACAGATCGTGAAGGACGGAGGAATACTGAATGCCTTTCTTGGGGGATTGACAAAGAACGAGTTCTCAAAGGCAGAACTGGAATTGAGGTCTATTTTGATATGATGAGAAGCTTTCGGACAGAGTTTGATGACCTGTTTGTAGAAGGTCTGATTTCTGCTGTTGAAGTTGGATTGGGAGCATCTGGAGAGTTGAAATATCCTTCTTTCTCAGAAAGAATGGGATGGAGGTATCCTGGTATCGGTGAGTTTCAGTGCTATGATAAATACCTGCAACATAGTCTGCGCAAAGCAGCCAAATTACGTGGTCACTCTTTTTGGGCTAGAGGACCTGATAATGCTGGACATTACAATTCTATGCCACATGAAACTGGATTCTTTTGTGAGCGAGGTGATTATGACAACTATTATGGACGCTTCTTCTTACATTGGTACTCCCATACATTAATAGACCATGCAGATAATGTTTTGTCTCTTGCAACCCTTGCTTTCGAGGAAACAAAAATAATTGTCAAGGTTCCTGCTGTATACTGGTGGTACAAGACTTCTAGTCATGCAGCAGAGTTGACAGCAGGATATCACAATCCAACAAATCAGGATGGATACTCTCCTCTGTTTGAGGTTCTGAGAAAACATGCTGTCACAATGAAATTTGTCTGCTTAGGATTTCATCTTTCCAGCCAGGAAGCTAATGAATCATTGATTGATCCAGAGGGTTTGAGTTGGCAGGTGCTAAACTCAGCTTGGGATCGTGGGTTGATGGCTGCTGGAGAGAATGCACTCCTTTGCTATGATAGAGAAGGGTACAAAAGATTGGTCGAGATGGCAAAGCCCAGAAATGATCCTGATCACCGGCACTTCTCATTCTTTGTTTATCAGCAACCATCTTTGCTGCAGGCAAATGTTTGCTTGCCTGAACTTGATTTCTTCGTCAAATGCATGCATGGTGAGATGACAGATCTATAA 1983 0.4624 MKSINDDASTQDLDPQSDHSSDYLAQPNSHPQPHPQPRRPRGFAAAAAATTTNSAGKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWVVDADGTTYRQCPAPSHMGSFAARSVESQLSGGSGSLRNCSVKETIENQTSVLRIDECLSPASIDSVVIAERDSKNEKYTNASPINTVDCLEADQLMQDIHSGVHENDFTGTPYVPVYVKLPAGIINKFCQLIDPEGIKQELIHIKSLNVDGVVVDCWWGIVEGWSSQKYVWSGYRELFNIIREFKLKLQVVMAFHECGGNDSSDALISLPQWVLDIGKDNQDIFFTDREGRRNTECLSWGIDKERVLKGRTGIEVYFDMMRSFRTEFDDLFVEGLISAVEVGLGASGELKYPSFSERMGWRYPGIGEFQCYDKYLQHSLRKAAKLRGHSFWARGPDNAGHYNSMPHETGFFCERGDYDNYYGRFFLHWYSHTLIDHADNVLSLATLAFEETKIIVKVPAVYWWYKTSSHAAELTAGYHNPTNQDGYSPLFEVLRKHAVTMKFVCLGFHLSSQEANESLIDPEGLSWQVLNSAWDRGLMAAGENALLCYDREGYKRLVEMAKPRNDPDHRHFSFFVYQQPSLLQANVCLPELDFFVKCMHGEMTDL 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1057 660 SUPERFAMILY (Trans)glycosidases 223 657 IPR017853 -
Aed11g1057 660 MobiDBLite consensus disorder prediction 1 73 - -
Aed11g1057 660 MobiDBLite consensus disorder prediction 56 73 - -
Aed11g1057 660 Gene3D Glycosidases 219 660 - -
Aed11g1057 660 Pfam Glycosyl hydrolase family 14 246 622 IPR001554 GO:0000272|GO:0016161
Aed11g1057 660 PANTHER - 61 658 IPR001554 GO:0000272|GO:0016161
Aed11g1057 660 PANTHER BETA-AMYLASE 8 61 658 - -
Aed11g1057 660 Pfam BES1/BZR1 plant transcription factor, N-terminal 56 205 IPR008540 -
Aed11g1057 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 523 534 IPR001554 GO:0000272|GO:0016161
Aed11g1057 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 579 601 IPR001554 GO:0000272|GO:0016161
Aed11g1057 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 306 327 IPR001554 GO:0000272|GO:0016161
Aed11g1057 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 263 277 IPR001554 GO:0000272|GO:0016161
Aed11g1057 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 284 302 IPR001554 GO:0000272|GO:0016161
Aed11g1057 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 399 421 IPR001554 GO:0000272|GO:0016161
Aed11g1057 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 472 491 IPR001554 GO:0000272|GO:0016161
Aed11g1057 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 506 522 IPR001554 GO:0000272|GO:0016161
Aed11g1057 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 541 564 IPR001554 GO:0000272|GO:0016161
Aed11g1057 660 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1057 Aed-Chr11 16287254 16292956 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1057 14 659 Glycoside Hydrolase AT5G45300 66.617 0.0 894
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Aed11g1057 Glyco_hydro_14 4.4e-88 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1057 K01177 - gmx:100777004 1268.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1057 11 16287254 16292956 Aed11g1057 11 16287254 16292956 ECH