Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1055 ATGAAAATAATGGAGAGTGCGAGAATAAGCCAGTGGTTGAACCTTCTGGTGTGTGCGCTGTTGTTGCTGATATCAGAAGCTTCATTTGTACCAATCACTATTGTTCAGAATGCAGTAGCAAAAGGAGCAGTTTGTTTGGATGGGAGTCCACCAGCTTATCATTTTGATAAGGGATTTGGATCAGGGATTAACAATTGGTTGGTTGCATTTGAGGGAGGAGGATGGTGCAACAATGTCACTACTTGCCTTGCTCGCAAGACCAATCGTTTAGGTTCATCTAAGCAAATGGCAAAGGAAATTGCCTTTTCAGGAATTTTGAGCAACAGGGCAGTGTTTAATCCAGATTTCTACAACTGGAACAGAATCAAGGTTAGGTATTGTGATGGTTCATCGTTTACTGGTGACGTGGAAGCAGTGAATCCAGTAACTAAGTTGCACTTCAGAGGAGGAAGGATTTTCAATGCTGTCATGGAGGATTTACTAGCAAAAGGAATGAAAACTGCTCAAAATGCTATTATGTCAGGATGTTCAGCTGGAGGATTAACTACAGTACTGCATTGTGATCGATTCCGAGCTATATTTCCTGCAGGAGCTAGAGTGAAATGCCTCTCAGATGCTGGTTACTTTATCAATGCAAAGGATGTCTTGGGAGAACAACACATTGAACAGTACTTCAGTCAAGTTGTTGCCACACATGGCTCTGCAAGGAATTTGCCTCCATCATGCACTTCAAGACTTAGCCTAAGGCTGTGCTTTTTTCCACAATATCTGGTGTCACGTATCATTACACCAATCTTCTTTGTCAACGCCGCATATGACTCATGGCAGATTAAGAACATTTTGGCACCGGGTGTTGCTGATCCTGAAGGCCATTGGCATAGCTGCAAGCTTGATATAAACAACTGCTCACCTGATCAACTCGATCTAATGCAAGGGTTCAGGACAGAATTTTTAAGGGCTATAAATGTGCTAGGCAACTCTTCAGCTAAAGGAATGTTCATAGACTCTTGCTATGCTCATTGTCAAACTGAAATGCAAGAGACATGGTTGAGAAGTGACTCTCCAGAGCTGAGAAACACAACAATTGCAAAGGCTGTAGCAGATTGGTTTTATGAAAGAAGATCATTCCATCAGATAGATTGCCCTTACCCTTGCAATCCAACTTGTCACAACCGCGTTTTCGATCCACAAGACGACCATCCAGGAGTATAG 1212 0.4249 MKIMESARISQWLNLLVCALLLLISEASFVPITIVQNAVAKGAVCLDGSPPAYHFDKGFGSGINNWLVAFEGGGWCNNVTTCLARKTNRLGSSKQMAKEIAFSGILSNRAVFNPDFYNWNRIKVRYCDGSSFTGDVEAVNPVTKLHFRGGRIFNAVMEDLLAKGMKTAQNAIMSGCSAGGLTTVLHCDRFRAIFPAGARVKCLSDAGYFINAKDVLGEQHIEQYFSQVVATHGSARNLPPSCTSRLSLRLCFFPQYLVSRIITPIFFVNAAYDSWQIKNILAPGVADPEGHWHSCKLDINNCSPDQLDLMQGFRTEFLRAINVLGNSSAKGMFIDSCYAHCQTEMQETWLRSDSPELRNTTIAKAVADWFYERRSFHQIDCPYPCNPTCHNRVFDPQDDHPGV 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1055 403 Pfam Pectinacetylesterase 25 374 IPR004963 GO:0016787
Aed11g1055 403 PANTHER PECTIN ACETYLESTERASE 6 397 - -
Aed11g1055 403 PANTHER NOTUM-RELATED 6 397 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1055 Aed-Chr11 16272741 16279818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1055 8 401 Carbohydrate Esterase AT4G19420 60.373 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1055 K19882 - gmx:100776478 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1055 11 16272741 16279818 Aed11g1055 11 16272741 16279818 ECH
Aed11g1055 11 16272741 16279818 Aed7g1354 7 11573168 11578402 PCT
Aed7g1353 7 11562938 11567138 Aed11g1055 11 16272741 16279818 PCT