Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1050 ATGAAGCAGCCATCAAAATCAAAGCCATGGAGACCCTTCACAGCAAATTGCTGCTCCACAGAGAACCAAACCATATTTAGAAACTTCAGCAGATGCAAGCCTTCGTCACGTTCAGATAATTTCTCTAAGGACATTGCACCACTGCCATCGTTCAGGAGGCTCTCTTTCTCTGATCTGAGCCGTTCATCATCGACGCGAATCAACGAAGATCTTGCTCAGTCATTTGGCTCGGACTTGTTTGATTTTCAGCTTAGTGAGCTGCGTGCCATAACGCAGAATTTCAGCAGCAATTTCTTGCTTGGTGAAGGTGGCTTTGGAACAGTGCATAAGGGTTACTTAGATGACAATTTCAGGCTTAGTTTGAAGGCACAACCTGTTGCTGTTAAGCTACTTGACATTGAAGGCTTGCAAGGACACCGTGAATGGCTTGAGTTCACAGCAAAATTGTCTGATTTTGGACTTGCAAAAATGGGACCAGAGGGATCAAACACACATGTTTCAACCAGAGTTATGGGCACTTATGGATATGCAGCCCCAGAATACATCTCAACAGGGCATTTAACCACCAAGAGTGATGTTTATAGCTTCGGAGTAGTCCTGCTAGAACTGCTTACAGGAAGGAGAGCAACAGACAAAACAAGACCAAAGACTGAGCAAAACCTTGTGGATTGGTCAAAACCTTACTTGAGTAGCAGTAGGAGATTGAGGTACATTATGGATCCAAGGCTTGCAGGCCAATATTCTGTGAAGGGTGCAAAAGAGATGGCCTATTTGGCATTGCAATGCATAAGTTTGAATCCTAAAGACAGACCAAGAATGCCAACAATTGTTGAAACTCTTGAAGGCTTGCAACAGTACAAGGACATGGCTGTTACCAGTGGACACTGGCCACTGACACCAAAATCTACCAGGAATAGGGTCTCCAACAATAAGGTGAATGTGAAAGCTAGAGCTGGTGCAAACCACAAGCAACCTTCTCCAGTTCCGAGCAGAAAAACTTGA 1002 0.4441 MKQPSKSKPWRPFTANCCSTENQTIFRNFSRCKPSSRSDNFSKDIAPLPSFRRLSFSDLSRSSSTRINEDLAQSFGSDLFDFQLSELRAITQNFSSNFLLGEGGFGTVHKGYLDDNFRLSLKAQPVAVKLLDIEGLQGHREWLEFTAKLSDFGLAKMGPEGSNTHVSTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRATDKTRPKTEQNLVDWSKPYLSSSRRLRYIMDPRLAGQYSVKGAKEMAYLALQCISLNPKDRPRMPTIVETLEGLQQYKDMAVTSGHWPLTPKSTRNRVSNNKVNVKARAGANHKQPSPVPSRKT 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1050 333 MobiDBLite consensus disorder prediction 314 333 - -
Aed11g1050 333 PANTHER SERINE/THREONINE-PROTEIN KINASE, ACTIVE SITE PROTEIN-RELATED 144 319 - -
Aed11g1050 333 PANTHER SERINE/THREONINE-PROTEIN KINASE, ACTIVE SITE PROTEIN-RELATED 32 143 - -
Aed11g1050 333 ProSiteProfiles Protein kinase domain profile. 1 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1050 333 Gene3D Phosphorylase Kinase; domain 1 74 147 - -
Aed11g1050 333 Gene3D Transferase(Phosphotransferase) domain 1 148 317 - -
Aed11g1050 333 SUPERFAMILY Protein kinase-like (PK-like) 82 303 IPR011009 -
Aed11g1050 333 Pfam Protein kinase domain 147 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1050 333 PANTHER OS01G0588500 PROTEIN-RELATED 144 319 - -
Aed11g1050 333 PANTHER OS01G0588500 PROTEIN-RELATED 32 143 - -
Aed11g1050 333 ProSitePatterns Protein kinases ATP-binding region signature. 100 129 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1050 Aed-Chr11 16247057 16249607 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1050 144 320 Glycoside Hydrolase AT3G07070 48.023 4.77e-48 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aed11g1050 Pkinase 8e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1050 - - gmx:100814241 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1050 11 16247057 16249607 Aed11g1050 11 16247057 16249607 ECH