Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1046 ATGGGCATTTGTCTTTTGAAATGGCAATGGCCGTGGCTTCTTTGTATTCTGCTGATACATGTTGTAATTGTAATTAATAAAAGCGAAGCAATCACTCCCGATGGTGAGGTGCTTCTCAGCTTTAGGACAGCAGTTGTTAGTTCTGATGGTGTCCTATTACAGTGGAGGCCAGAGGATCCTAACCCATGTAAATGGAAAGGAGTGAAGTGTGATCCAAAAACCAAAAGAGTAACACATCTGAGTCTATCTCACCATAAGTTAAGCGGGTCCATATCACCTGACCTTGGGAAACTAGAGAATCTGAGGGTTCTTGCTCTTCATAACAACAACTTCTATGGGACAATTCCATCAGCATTGGGAAATTGCACTGAATTGGAGGGAATATTTTTACAGGGTAATTACCTTAGTGGAATTATTCCAAGTGAAATAGGAAACCTTTCACAGCTTCAAAATATGGATATATCAAGCAATTCCCTCAGTGGGAATATTCCTGCATCACTTGGGAAGTTGCATAATCTCAAAAATTTCAATGTATCAACCAATTTTCTGCTCGGACCTATACCTTCTGATGGTGTCCTTGCCAACTTTTCTGGAAGCTCCTTTGTTGGAAATCGTGGTTTGTGTGGAGTGACAATAAATTCAACATGTAAAGATGATGGTTCGCCGGATACCAATAGTCAATCTTCTTCCTCAGACCCAAATCAAAATGGGAAGAGGAAATATTCTGGCCGGCTGCTCATTAGTGCATCAGCAACTGTGGGAGCTTTACTTTTGGTGGCACTTATGTGCTTCTGGGGTTGTTTTCTTTATAAGAAGTTTGGCAAAAATGACAGAATAAGTCTGGCAATGGATGTTGGTGCAGGTGCATCAATTGTGATGTTTCATGGAGACCTACCATATTCTTCAAAAGACATCATTAAGAAACTAGAGACTTTGAATGAGGAACACATAATAGGGATAGGGGGATTTGGTACTGTTTACAAGCTTGCAATGGATGATGGGAATGTATTTGCTCTGAAAAGGATTGTAAAGTTGAATGAGGGGTTTGATCGTTTTTTTGAGAGGGAGCTTGAAATTCTTGGTAGCATCAAACACCGTTATCTAGTGAACTTACGAGGATATTGCAATTCACCTACGTCAAAGTTGTTAATATATGATTACCTACCAGGTGGTAGTCTTGATGAAGCACTTCATGAGTATATGCAAAGTGGCAGAGCAACTGAGAAGTCCGATGTGTATAGCTTTGGTGTGCTGACACTTGAAGTGCTGAGTGGAAAGCGGCCAACAGACGCAGCATTCATTGAAAAGGGTCTCAATATTGTTGGTTGGTTGAATTTTCTAATTACAGAAAATAGGCAGAGGGAAATTGTTGACCCTCTATGTGAAGGGGTGCAAATAGAGAGCCTTGACGCCCTGCTCTCTGTGGCTATTCAGTGTGTTTCCTCAGGTCCAGAGGATCGACCCACTATGCATCGAGTGGTGCAACTGCTTGAATCAGAGGTCGTAACTCCATGCCCTAGTGACTTCTATGATTCCAACTCCGATTAG 1548 0.4154 MGICLLKWQWPWLLCILLIHVVIVINKSEAITPDGEVLLSFRTAVVSSDGVLLQWRPEDPNPCKWKGVKCDPKTKRVTHLSLSHHKLSGSISPDLGKLENLRVLALHNNNFYGTIPSALGNCTELEGIFLQGNYLSGIIPSEIGNLSQLQNMDISSNSLSGNIPASLGKLHNLKNFNVSTNFLLGPIPSDGVLANFSGSSFVGNRGLCGVTINSTCKDDGSPDTNSQSSSSDPNQNGKRKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDRISLAMDVGAGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGIGGFGTVYKLAMDDGNVFALKRIVKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDYLPGGSLDEALHEYMQSGRATEKSDVYSFGVLTLEVLSGKRPTDAAFIEKGLNIVGWLNFLITENRQREIVDPLCEGVQIESLDALLSVAIQCVSSGPEDRPTMHRVVQLLESEVVTPCPSDFYDSNSD 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1046 515 Pfam Protein kinase domain 314 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1046 515 MobiDBLite consensus disorder prediction 218 237 - -
Aed11g1046 515 SUPERFAMILY L domain-like 32 196 - -
Aed11g1046 515 ProSitePatterns Protein kinases ATP-binding region signature. 318 344 IPR017441 GO:0005524
Aed11g1046 515 SUPERFAMILY Protein kinase-like (PK-like) 301 504 IPR011009 -
Aed11g1046 515 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Aed11g1046 515 ProSiteProfiles Protein kinase domain profile. 312 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g1046 515 PANTHER RECEPTOR-LIKE PROTEIN 55 3 398 - -
Aed11g1046 515 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FEI 1 3 398 IPR031071 GO:0004672|GO:0005524|GO:0030244
Aed11g1046 515 PANTHER RECEPTOR-LIKE PROTEIN 55 399 515 - -
Aed11g1046 515 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FEI 1 399 515 IPR031071 GO:0004672|GO:0005524|GO:0030244
Aed11g1046 515 Gene3D Ribonuclease Inhibitor 32 217 IPR032675 -
Aed11g1046 515 Gene3D Transferase(Phosphotransferase) domain 1 384 502 - -
Aed11g1046 515 Gene3D Phosphorylase Kinase; domain 1 285 383 - -
Aed11g1046 515 Pfam Leucine rich repeat 100 159 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1046 Aed-Chr11 16227059 16236473 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1046 399 506 Receptor kinase-like Gene Family AT2G35620 82.407 2.56e-53 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Aed11g1046 Pkinase 1.5e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1046 - - gmx:100819230 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1046 11 16227059 16236473 Aed11g1046 11 16227059 16236473 ECH