Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1043 ATGGACCCCCTGGCTGCCCGGCTGGGCATGGTGACGCCGTCGCTGCTGAATCCGGTGACGACGGCGGTGGCGAGGGAGGAGAGGGCCCCGGCTCAACCGCAGTGGAGCCAGCAGGAAACGAGAGAGTTCATAGCGATTCGCGCGGAGCTGGAGAGGGACTTCACTGCGTCGAAGCGGAACAAGACGCTCTGGGAAGTGGTGAGTTCGAAGATGAGGGAAAGAGGCTTCAGGAGAAGCCCCGAACAGTGCAAATGCAAGTGGAAGAACCTCGTTAATCGCTATAAGGGAAAAGAGACATCTGACCCAGAGCATGGGAAGCAATGCCCTTTTTTTGAAGAATTGCATGCAGTCTTTACCCAAAGGGCACATAATATGCAAAGATTGCTTCTTGAATCTGAAACTCGTACAGCTCAAACCAACAAGAAAGGAGTGAAAAGATCAAGTGGAGACCGGTCCTCAGAGGAACTCTCGGAAGATGACGACAATGAGGTTGAATATGACAGCGAAGAGGAAAAACCTTCCAGAAGCAATACCCGAAAAAGAAAAGTTGGATTGGACAAGTCTTCAAGGGCAAACAATCCATCGAATAGTACTAGCAGTATTCAGGAAATGCTCAAGGAATTTTTCCAGAACCAGTTAAGGATGGAGATGCAGTGGAGGGAGATGATGGAAAGGCGTGCTCATGAAAGACAGTTGTTTGAACAGGAATGGCGGCAGTCGATGGAGAAGCTTGAGAGGGAGAGGTTAATGATTGAACAGGCATGGAGGGAGAGAGAAGAACAGAGGAGAATCAGAGAAGAGAGTAGGGCAGAGAGAAGGGATGCTTTGTTGACCACCCTTTTGAACAAACTCATTAATGAATCTAACTAA 870 0.492 MDPLAARLGMVTPSLLNPVTTAVAREERAPAQPQWSQQETREFIAIRAELERDFTASKRNKTLWEVVSSKMRERGFRRSPEQCKCKWKNLVNRYKGKETSDPEHGKQCPFFEELHAVFTQRAHNMQRLLLESETRTAQTNKKGVKRSSGDRSSEELSEDDDNEVEYDSEEEKPSRSNTRKRKVGLDKSSRANNPSNSTSSIQEMLKEFFQNQLRMEMQWREMMERRAHERQLFEQEWRQSMEKLERERLMIEQAWREREEQRRIREESRAERRDALLTTLLNKLINESN 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1043 289 PANTHER - 23 287 - -
Aed11g1043 289 Coils Coil 234 254 - -
Aed11g1043 289 PANTHER - 23 287 - -
Aed11g1043 289 MobiDBLite consensus disorder prediction 138 153 - -
Aed11g1043 289 Pfam Myb/SANT-like DNA-binding domain 33 116 IPR044822 -
Aed11g1043 289 SMART sant 31 93 IPR001005 -
Aed11g1043 289 MobiDBLite consensus disorder prediction 131 201 - -
Aed11g1043 289 MobiDBLite consensus disorder prediction 168 187 - -
Aed11g1043 289 CDD GT1 33 98 - -
Aed11g1043 289 Gene3D - 35 96 - -
Aed11g1043 289 ProSiteProfiles Myb-like domain profile. 35 91 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1043 Aed-Chr11 16217001 16219554 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1043 12 289 Trihelix Transcription Factor Family AT2G38250 43.929 7.14e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aed11g1043 Myb_DNA-bind_4 1.4e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1043 - - gmx:100812635 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1043 11 16217001 16219554 Aed11g1043 11 16217001 16219554 ECH