Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1038 ATGGCTAGATCTAAACGACGGCGGTCGGTTACTATTGGAAGACCAGGGAATATGACTTTTGAGCCTATTTTGGAAGATGGAGTGTTCCGTTTCGATTGTTCTGTAAATGTTAGAGATGCAGCGTGTCCCAGTATTTCTTTTGTGAATAACAATGATAGAGACACATCTATCTATACTGAGGATGTTCCTCTGTATACCCCTACGTTTGAGTGTCGATCAGAGAAGCAGGTTGTCAAACTTGAGCTGCCTGTAGGTTCTTCCCTTTATGGAACAGGAGAAGCTAGTGGAGTGCTCGAGAGGACAGGCAAAAGAGTTTTCACATGGAACACGGATGCATGGGGTTATGGACCTGGAACTACATCCTTGTACCAATCACATCCATGGGTGTTAGCTGTTCTTCCAAATGGTGAGGCACTAGGAATCCTTGCCGACACTACAAGGCGCTGTGAGATTAATCTGAGGAAAGAATCAACAATACAGTTTGTTGCTCCATCCCCATATCCTGTCATTACATTTGGTCCTTTTGCTTCACCCACGGAAGTGTTGATATCTCTATCAAAAGCAATTGGAACTGTATTTATGCCCCCAAAATGGTCATTAGGTTATCATCAATGCCATTCAAGTTATTTATCTGATGAGAGAGTTCTGGAGGTTTCTAAAACTTTTCGGAACAAGAGCATACCTTGTGATGTGTTATGGATGGATATCAATTACATGGATGGTTTTCGTTGTTTCACCTTTGACAAGGCAGGGGAAGTGTGGCCTGGGCCATGTGTCTTCCCTGACTATACACAGTCAAAAGTTCGTGCATGGTGGGCAAATTTAGTTAAAGACTTCATATCCAAAGGTGTTGATGGTATATGGAATGATATGAACGAACCAGCTATCTTTAAGGTTGCAACAAAAACAATGCCTGATAGCAATGTTCATAGTGGAGATAGTGAACTTGGAGGTTGTCGGAATCATTCTTTCTATCATAATGTGTATGGTCTTCTGATGGCAAGATCAACCTATGAAGGCATGAAACTAGCTAATGCAAAGAAGCGTCCTTTTGTTCTCACGAGATCTGGATTTATTGGCAGCCAAAGGTATGCTGCAACATGGACTGGTGATAATCTTTCAACCTGGGAGCATCTTCATATGAGTATCTCCATGCCACTTTCAGGTGCTGATATTGGTGGATTTGCTGGAAATGCAACACCTAGACTTTTTGGAAGGTGGATGGGTATTGGTTCCTTATTTCCCTTTTGCCGAGTGCATTCTGAAGCTTGCACCACTGACCACGTACCCTGGTCTTTCGGGGAAGAGTGTGAAGAAGTTTGCCGATTGGCATTGAAGAGGCGCTACCGCCTGATCCCACTTTTCTACACTCTTTTTTATTTTGCTCATACACAGGGCACACCAGTGGCAACCCCTACTTTCTTTGCTGATCCAAAAGATCCTAGCCTGAGGAAGCTTGAAAATTCATTTTTGGTTGGTCCAGTCTTAGTTTATGCAAGCACCTTACGTAGACAGGGGTTGGATAAGTTGGAGATTATTTTGCCCAAGGGGATATGGTTGAATTTTGATTTCAACGATGCACATCCGGATTTGCCAGCTTTATTCTTAAAAGGTGGCTCGATTATTCCTGTGGGACTCCCTCTTCAGCATGTTGGAGAGGCTAATCCTTCAGATGACTTGACTCTTCTTCTTGAGACATGGGGTACTGATGGAGAAGTTCTGCAACTAATGTTGCCTTCGGAAGATGAGGTGTTGAAGCTAGTGTCTACTAGTGAGCAGCAATACAAGGACCGTCTGGAGAGTGCAACTCCAATTCCTGATGTAGAATTAGAAGAGGTTTCTGGACCTAAGGGAACAGAGGTTTTCAGAACTCCCATCGAACAGACAAGTGACATAGAAGATCATTCTGAGGAGGTGAATATGCTAGATGAGGTGAATACACCAACTGATGGAGCAATAAATATGACTTTTGATTGTAGTGATGCATTCGAGACTACAGAGGTTTTCCCTTCCCGAGATGCTGTGCTGAACTGGGCTAGAGAAGTTGCAAAAGAGAATGGATTTGTCCTTACTATTTTGAGGTCAGAAACACATAAAGGAAGTAATAAAAAGAATAATAAAGGGAAGACATATGTAATTCTGGGTTGCGAAAGGAGTGGAAAATATAGACCATACAAGAATGCATTATCTAAGGTGACTACTTCCAAAAAATGTGAGTGTCCCTTCAAGCTAAGGGGAAAAGCTTTAAAAAGAGATGAAGGATGGACTGTTAAGGTAATGTGTGGTTATCACAACCATGACTTAGGGGAAACATTAGTGGTGGGTCATTCATATGCTGGCCGACTGAGTGCTGAAGAGAAGTCTTTGGTCATTGATATGACAAAGAAAATGGTGGAGCCGAGAAATATACTACTAACCTTGAAGGATCACAATAATGTCACTACTATCAGGCATATTTACAATGCTCGACAAGCATTTCGATCTTCTCAGAAAGGTCCTAGGACAGAAATGCAACACCTACTAAAGTTATTGGAACGTGATCAATATGTGTATTGGAGTAGAAAGGTGGACGATTCCGATGATATCAGAGATATATTTTGGACACATCCAGATGCCATCAAACTTTTAAGTTCTTTCCACACTGTCTTGCTCCTTGATAATACTTATAAAGTCAATAGGCATCAATTGCCACTACTTGAGATTGTTGGTGTTACTTCAACCGAATTAACTTTCTCTGTGGCATTTGCTTATATGGAGTCAGATGAAGTTGATAACTTCACTTGGGCACTACAAAAGTTAAGAGAACTGATTGTCAAAGACAGCGAGATACCTCCTGTGATTGTAACTGTTAGGGACATTGCTCTAATGGATGCAGTGCAGGTGGTCTTTCCAAGCTCTTCTAATTTGTTATGTCGTTTTCATATAAGCAAGAATGTGAAGGCTAAATGCAAGTTGATAGTTCATCCGAAGGAGAATTATGATTTGGTGATGGATGCATGGGACAGTGTTATGAATTCTCCTAATGAGGGCGAGTATGTGCAACGTTTGACATTACTTGAGAATGTTTGCTCTGATTTTCCTATTTTTGGTGATTATGTGAAAAATACGTGGCTTCCTCACAAGGAAAAGTTTGTCACGGCATGGGTGAATCGAGTGATGCATTTGGGTAATGCAACAATCGATAGGGTTGAAACAACACATTGGAGGCTGGAGAACTTGCTTCAAGATAGTGGGGGTGATATGTGTAGTTGTTGGGATGCTTTGAACAACATGATTAAATGGCAACACACACAGATTAAGGTGTCATTTGAGAAAAGTATAAACACAGTGGATTACAGTACTCCATTCTACAGCAAGCTGAGGGGATTTGTATCAAGGAATGCATTGAGTAATATAGCTGACCATTATGACCGAGTTAAAACCGTTGGTATGGATATTATCAATAGTTCTATATGTGGATGCACAATTAGAATTACACATGGTCTACCTTGTGCATGCGAACTTGCTAGGTATAGTAGGATGGGTCACCCAGTTCCCTTGCAAGCAATTCATGTTCATTGGAGAACATTAAACTTCAGTGACCAAGAAATGATTGAGGGGTTCGAGTCATTGTTGCAAGGTGAAGTGGATGCTTTGCACAAGCAATTTCAGGAACTTGATTATGTTGGAAAAATCACTTTGAAGGCCAAATTACGTGAACTAGTATGTCCTGATATAATAACGTGTTTGCCTCCTGAAAATCTAAGAATAAATGATGCTCCAATGGATCTAGGGTCAGACAGAAACGAATCAATTGAACGTGATCCTTCATCCTAG 3816 0.4122 MARSKRRRSVTIGRPGNMTFEPILEDGVFRFDCSVNVRDAACPSISFVNNNDRDTSIYTEDVPLYTPTFECRSEKQVVKLELPVGSSLYGTGEASGVLERTGKRVFTWNTDAWGYGPGTTSLYQSHPWVLAVLPNGEALGILADTTRRCEINLRKESTIQFVAPSPYPVITFGPFASPTEVLISLSKAIGTVFMPPKWSLGYHQCHSSYLSDERVLEVSKTFRNKSIPCDVLWMDINYMDGFRCFTFDKAGEVWPGPCVFPDYTQSKVRAWWANLVKDFISKGVDGIWNDMNEPAIFKVATKTMPDSNVHSGDSELGGCRNHSFYHNVYGLLMARSTYEGMKLANAKKRPFVLTRSGFIGSQRYAATWTGDNLSTWEHLHMSISMPLSGADIGGFAGNATPRLFGRWMGIGSLFPFCRVHSEACTTDHVPWSFGEECEEVCRLALKRRYRLIPLFYTLFYFAHTQGTPVATPTFFADPKDPSLRKLENSFLVGPVLVYASTLRRQGLDKLEIILPKGIWLNFDFNDAHPDLPALFLKGGSIIPVGLPLQHVGEANPSDDLTLLLETWGTDGEVLQLMLPSEDEVLKLVSTSEQQYKDRLESATPIPDVELEEVSGPKGTEVFRTPIEQTSDIEDHSEEVNMLDEVNTPTDGAINMTFDCSDAFETTEVFPSRDAVLNWAREVAKENGFVLTILRSETHKGSNKKNNKGKTYVILGCERSGKYRPYKNALSKVTTSKKCECPFKLRGKALKRDEGWTVKVMCGYHNHDLGETLVVGHSYAGRLSAEEKSLVIDMTKKMVEPRNILLTLKDHNNVTTIRHIYNARQAFRSSQKGPRTEMQHLLKLLERDQYVYWSRKVDDSDDIRDIFWTHPDAIKLLSSFHTVLLLDNTYKVNRHQLPLLEIVGVTSTELTFSVAFAYMESDEVDNFTWALQKLRELIVKDSEIPPVIVTVRDIALMDAVQVVFPSSSNLLCRFHISKNVKAKCKLIVHPKENYDLVMDAWDSVMNSPNEGEYVQRLTLLENVCSDFPIFGDYVKNTWLPHKEKFVTAWVNRVMHLGNATIDRVETTHWRLENLLQDSGGDMCSCWDALNNMIKWQHTQIKVSFEKSINTVDYSTPFYSKLRGFVSRNALSNIADHYDRVKTVGMDIINSSICGCTIRITHGLPCACELARYSRMGHPVPLQAIHVHWRTLNFSDQEMIEGFESLLQGEVDALHKQFQELDYVGKITLKAKLRELVCPDIITCLPPENLRINDAPMDLGSDRNESIERDPSS 1271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1038 1271 Pfam MULE transposase domain 882 978 IPR018289 -
Aed11g1038 1271 Pfam Glycosyl hydrolases family 31 251 542 IPR000322 GO:0004553|GO:0005975
Aed11g1038 1271 SUPERFAMILY (Trans)glycosidases 187 466 IPR017853 -
Aed11g1038 1271 Gene3D glycosyl hydrolase (family 31) 32 173 - -
Aed11g1038 1271 Pfam Glycosyl hydrolases family 31 177 249 IPR000322 GO:0004553|GO:0005975
Aed11g1038 1271 PANTHER ALPHA-GLUCOSIDASE 251 564 - -
Aed11g1038 1271 PANTHER ALPHA-GLUCOSIDASE 9 250 - -
Aed11g1038 1271 PANTHER ALPHA-GLUCOSIDASE 563 635 - -
Aed11g1038 1271 Pfam Galactose mutarotase-like 87 151 IPR025887 -
Aed11g1038 1271 SUPERFAMILY Galactose mutarotase-like 69 163 IPR011013 GO:0003824|GO:0005975|GO:0030246
Aed11g1038 1271 SUPERFAMILY Glycosyl hydrolase domain 468 527 - -
Aed11g1038 1271 CDD GH31_glucosidase_II_MalA 190 466 - -
Aed11g1038 1271 ProSitePatterns Glycosyl hydrolases family 31 active site. 286 293 IPR030458 -
Aed11g1038 1271 PANTHER BNAA01G23630D PROTEIN 251 564 - -
Aed11g1038 1271 PANTHER BNAA01G23630D PROTEIN 9 250 - -
Aed11g1038 1271 PANTHER BNAA01G23630D PROTEIN 563 635 - -
Aed11g1038 1271 CDD GH31_N 78 190 - -
Aed11g1038 1271 Gene3D - 469 552 IPR013780 -
Aed11g1038 1271 Gene3D Glycosidases 179 250 - -
Aed11g1038 1271 Gene3D Glycosidases 251 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1038 Aed-Chr11 16185510 16197961 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1038 563 630 Glycoside Hydrolase AT3G23640 38.235 4.97e-08 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aed11g1038 Glyco_hydro_31 2e-79 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1038 - - gmx:100782358 1185.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1038 11 16185510 16197961 Aed11g1038 11 16185510 16197961 ECH