Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1031 ATGAGTTCCAATTCCAAACAAAATCTCACAGCAGAGGTAGTCAAGGTCGACGATGCTTACCTCTCTGCTGTGTTACTTAGTTCTAGCTGGGTTTTCCCTGCAATTCTAAATGCTGCTATTGATCTTAATTTGTTTGAGATCATAGCAAAAAAGGCACAAAGTTCATGTGATGATTCAACTAATTTCTCAGCCTCTGAAATTGCTTCTTTGCTTCCAAATCCACACCCTCAATTGGCAAATAGGCTTGAACGCATGTTACCTTTGTTGGCAAGTTATTCTCTTCTCAATTGCTCCATTCGCACAAATGAAGATGGCAAGAGTGAAAGAGTTTATGCTCTCTCAGACGTTGGTGCATACTTTGTTTGTGATAACGTTGGAGGTTCTTTGGGTCCAATCTCAACTTTGATGCACCGTGCATATCATGACATTTGGTAA 435 0.4023 MSSNSKQNLTAEVVKVDDAYLSAVLLSSSWVFPAILNAAIDLNLFEIIAKKAQSSCDDSTNFSASEIASLLPNPHPQLANRLERMLPLLASYSLLNCSIRTNEDGKSERVYALSDVGAYFVCDNVGGSLGPISTLMHRAYHDIW 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1031 144 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 144 IPR016461 GO:0008168
Aed11g1031 144 Gene3D - 1 120 IPR036388 -
Aed11g1031 144 PANTHER O-METHYLTRANSFERASE 1 144 IPR016461 GO:0008168
Aed11g1031 144 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 144 - -
Aed11g1031 144 Pfam Dimerisation domain 35 90 IPR012967 GO:0046983
Aed11g1031 144 SUPERFAMILY "Winged helix" DNA-binding domain 17 123 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1031 Aed-Chr11 16126222 16126656 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1031 23 144 Monolignol Biosynthesis Gene Families AT1G33030 41.270 2.07e-18 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1031 - - gmx:106794104 198.364