Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1030 ATGGATCCTAACAACAATAACCACTTTCTAAAAGTCCATGGAATGACATTTTATGAATATATGGGGACAAATAGTGACCTTAATCACGTTTTTAACAAAGCAATGACCCGATATGGCCCATTAGAAATGAAAAGGAACCTTTCTCTGTACAAAGGATTTGAGGGAATATCAACACTGGTTAATGTGGGAGGTAGATTGGGACAGGACTTGAAAATGATTATATCAGAGTATCCTTCAATAAAAGGAATTAATTTCGATTTGCCTCAAGTGGTTCAAGATGCACCACCCCATCCAGGGATAGAGCATGTTGGAGGAGATATGTTTGAAACTGTTCCAAAGGGTGATGCCATTTTATTAAAGGCTCACGCTAGAGTGTTTGTATGTCATAATTGGTCAGATGAGGAATGTGTAAAGTTTCTAAGGAATTGCCACAAAGCATTGGCAGAAGAAGGAAAAATGATTGTTTTGGAGTACATAATTCCTGAAGTTCCAGATTCAAGCAGAATATCTAAGCATAATTGTGCAATTGACAATCTCATGTTTTTAACTTCCAGTGGAAAGGAAAGAACTCTTAAGGAATTTGAGAGATTATATTTCACGTTGCTTGCAGCGAATTCTCAGTTATGTCGGGAGTGA 636 0.3726 MDPNNNNHFLKVHGMTFYEYMGTNSDLNHVFNKAMTRYGPLEMKRNLSLYKGFEGISTLVNVGGRLGQDLKMIISEYPSIKGINFDLPQVVQDAPPHPGIEHVGGDMFETVPKGDAILLKAHARVFVCHNWSDEECVKFLRNCHKALAEEGKMIVLEYIIPEVPDSSRISKHNCAIDNLMFLTSSGKERTLKEFERLYFTLLAANSQLCRE 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1030 211 Gene3D - 12 46 IPR036388 -
Aed11g1030 211 Gene3D Vaccinia Virus protein VP39 28 197 IPR029063 -
Aed11g1030 211 PANTHER O-METHYLTRANSFERASE 1 199 IPR016461 GO:0008168
Aed11g1030 211 Pfam O-methyltransferase domain 5 197 IPR001077 GO:0008171
Aed11g1030 211 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 211 IPR016461 GO:0008168
Aed11g1030 211 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 4 198 IPR029063 -
Aed11g1030 211 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1030 Aed-Chr11 16123579 16125484 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1030 9 197 Monolignol Biosynthesis Gene Families AT5G54160 55.789 5.01e-74 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1030 - - gmx:100793053 287.73