Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1029 ATGAGTTCCAACGTTTCCAATTCCAAACAAAACCACCATCTTCCCACAGAGGATGATGATAGCAATTACCTCTCAGCTCTGACATTAAGTTTCAGCCGAATTTTCCCGGCAATTCTAAATGCCGCTGTTGATCTCAATCTGTTTGATATCATAGCCAATGCCGAGAGTTCAACCTTATCAGCCTCTGAGATTGCTTCTTTGCTTCCAAATCCACACCCTCAATTGGCCAATAGGCTTGAACGCATTTTGCCTGTGTTGGCAAGTTACTCTCTTCTGAATTGTTCAATTCGCACTACGGATGAAGATGATGGTGGTGTGAGAGAGAGAGTTTATTCTCTCACACCCATTGGTCAATACTTTGCTTGTGACAATGGAGGTTCTTTGGGTCCTCTCTCTAGTTTGTTTCATCGTGGATACTTCCATGTCTTGAAGGACGTAAAGGATGCAATAATGGACCCAACCGACACTTATCATTTCGAAAAGGTCCATGGAATGCCGCAATATAAATACATGAAAACAAACGAAGAGCTGAATCAGCTTTTTAATAAGGCCCTGGGCCAAACTGGCCCACCTGCAATGCAAATGCTCCTTAAAGTATACAAAGGATTTGAGCAAGTTTCAACACTGGTGGATGTAGGTGGGATAGAACATGTTGAAGGAGATATGTTTCAAAGTGTTCCAAAGGGTGATGCCATTTTACTAAAGCTTGTATGCCACAATTGGTTAGATGAAGACTGTGAAAAGTTTTTAAAGAATTGCCACAAATCTTTGCCACAACATGGGAAGGTGATTATCATAGACTATATAATTCCAGAAGTTCCGGATTCAAGCAAAATTTCTAGGCAAGCTTGTGTTGCTGACAGTCTCATGTTTTTAGTAACAAAGGGAAAGGAAAGAACTGAGAAGGAATTTGAGAACTTGTGCAAGAAGTCTGGATTTTCTAGATTTCATGTTGCATGTAGAGATTCACCATCGGTTCTTTCAGTGGTGGAATTTTATAAATAA 1005 0.404 MSSNVSNSKQNHHLPTEDDDSNYLSALTLSFSRIFPAILNAAVDLNLFDIIANAESSTLSASEIASLLPNPHPQLANRLERILPVLASYSLLNCSIRTTDEDDGGVRERVYSLTPIGQYFACDNGGSLGPLSSLFHRGYFHVLKDVKDAIMDPTDTYHFEKVHGMPQYKYMKTNEELNQLFNKALGQTGPPAMQMLLKVYKGFEQVSTLVDVGGIEHVEGDMFQSVPKGDAILLKLVCHNWLDEDCEKFLKNCHKSLPQHGKVIIIDYIIPEVPDSSKISRQACVADSLMFLVTKGKERTEKEFENLCKKSGFSRFHVACRDSPSVLSVVEFYK 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1029 334 Gene3D Vaccinia Virus protein VP39 128 214 IPR029063 -
Aed11g1029 334 PANTHER O-METHYLTRANSFERASE 214 334 IPR016461 GO:0008168
Aed11g1029 334 PIRSF O-mtase 213 334 IPR016461 GO:0008168
Aed11g1029 334 PIRSF O-mtase 3 215 IPR016461 GO:0008168
Aed11g1029 334 SUPERFAMILY "Winged helix" DNA-binding domain 18 124 IPR036390 -
Aed11g1029 334 Pfam O-methyltransferase domain 215 314 IPR001077 GO:0008171
Aed11g1029 334 Pfam O-methyltransferase domain 145 214 IPR001077 GO:0008171
Aed11g1029 334 Pfam Dimerisation domain 38 87 IPR012967 GO:0046983
Aed11g1029 334 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 27 214 IPR016461 GO:0008168
Aed11g1029 334 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 6 214 - -
Aed11g1029 334 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 214 334 - -
Aed11g1029 334 Gene3D Vaccinia Virus protein VP39 215 334 IPR029063 -
Aed11g1029 334 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 215 334 IPR016461 GO:0008168
Aed11g1029 334 PANTHER O-METHYLTRANSFERASE 6 214 IPR016461 GO:0008168
Aed11g1029 334 Gene3D - 2 120 IPR036388 -
Aed11g1029 334 CDD AdoMet_MTases 214 270 - -
Aed11g1029 334 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 136 325 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1029 Aed-Chr11 16114980 16118616 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1029 19 320 Monolignol Biosynthesis Gene Families AT5G54160 39.535 5.20e-72 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1029 - - gmx:100793053 551.977