Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1028 ATGAGTTCCAAAGAGAGTCAAGTTCCCCAAGAAATTAAGGATGATGATGCTTTACTCTCTGCTGTGTTACTTTGCTTTAGCAGGGTTTTCCCAGCAATTCTAAATGCTGCAATTGATCTGAATTTGTTTGATATCATAGCAAAGGCACAGAGTTCATGTGATGATTCAACTAATTTCTCAGCCTCTGAAATTGCTTCTCTTCTTCCAAATCAACACCCTCAATTGGCTAATAGGCTTGAACACATGTTACCTTTGTTGGCAAGTTACTCTCTTCTAAATTGCTCCATTCGCACAAATGAAGATGGGGTGAGAGAAAGAGTTTATGCTCTCTCACCCGAAACTCTATAG 348 0.3937 MSSKESQVPQEIKDDDALLSAVLLCFSRVFPAILNAAIDLNLFDIIAKAQSSCDDSTNFSASEIASLLPNQHPQLANRLEHMLPLLASYSLLNCSIRTNEDGVRERVYALSPETL 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1028 115 Pfam Dimerisation domain 33 87 IPR012967 GO:0046983
Aed11g1028 115 Gene3D - 1 114 IPR036388 -
Aed11g1028 115 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 3 112 - -
Aed11g1028 115 SUPERFAMILY "Winged helix" DNA-binding domain 14 112 IPR036390 -
Aed11g1028 115 PANTHER O-METHYLTRANSFERASE 3 112 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1028 Aed-Chr11 16111232 16111607 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1028 2 112 Monolignol Biosynthesis Gene Families AT5G54160 40.708 1.90e-17 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1028 - - gmx:106794104 174.866