Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1027 ATGGACCCTAACAACAATAACCATTTCGAGCATGTTCATAAAATGCCATCATATGTTTATATGGAGAAAAATATAGAGCTGAGTCACATTTTTAACAAAGCAGTGTCTCACGCTGCCCCAATAGAACTGAAAAGAGCACTCAAATTATATAAAGGGTTTGAGGGAGTTTCAACACTGGTTGATGTAGGAGGTGGTATAGAACATATCGGAGGAGATATGTTTGAAGGTTTCCCAAGTGGTGATGCCATTTTACTACAGTTTGTATGCCATAATTGGTCAGATGAAGATTGTATAAAGATTTTAAGAAATTGTCATAAAGCCTTGCCACAGCAACATGGAAAAGTTATTGTTTGGGACTATGTAACTCCAGAGGTCCCAAATTCAAGCGATATATCAAAGCACACTTTTGCTTTGGACAATCTCATGTTTTTAGCACATGGTGGAAAGGAAAGAACTGAGAATGATTTTGAGAACTTATGCAAGACCTCTGGTTTTTCCAAGTTTCTTGTTGCAGGTGGTGACATCTCAGCTACACCAGGACTTATGGAATTTTATAAATAG 561 0.3743 MDPNNNNHFEHVHKMPSYVYMEKNIELSHIFNKAVSHAAPIELKRALKLYKGFEGVSTLVDVGGGIEHIGGDMFEGFPSGDAILLQFVCHNWSDEDCIKILRNCHKALPQQHGKVIVWDYVTPEVPNSSDISKHTFALDNLMFLAHGGKERTENDFENLCKTSGFSKFLVAGGDISATPGLMEFYK 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1027 186 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 65 186 - -
Aed11g1027 186 Pfam O-methyltransferase domain 66 166 IPR001077 GO:0008171
Aed11g1027 186 Gene3D Vaccinia Virus protein VP39 68 170 IPR029063 -
Aed11g1027 186 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 66 - -
Aed11g1027 186 PANTHER O-METHYLTRANSFERASE 65 186 IPR016461 GO:0008168
Aed11g1027 186 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 186 IPR016461 GO:0008168
Aed11g1027 186 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 4 167 IPR029063 -
Aed11g1027 186 Gene3D Vaccinia Virus protein VP39 1 67 IPR029063 -
Aed11g1027 186 PANTHER O-METHYLTRANSFERASE 1 66 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1027 Aed-Chr11 16109951 16110998 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1027 9 165 Monolignol Biosynthesis Gene Families AT5G54160 39.896 2.78e-42 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1027 - - gmx:106794104 281.567