Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1026 ATGAGTTCCAATTCAAAAGAGAGTGGTACTCTTGTTCCACCAGAAGTGGCAAAGGTAGATGATCCTTACCTCTATGCTGTGTTACTCTGCCTTAGCAGGGTCCTCCCTGCAGTTCTAAATGCTGCTGTTGATCTCAATTTGTTTGATATCATAGCAAAGGCACAACAAAGTTCATGTGATGATTCAACTAATTTCTCAGCATCTGAAATTGCTTCTTTGCTTCCAAATCCACACCCTCAATTGGCAAATAGGCTTGAACGCATGTTACCTTTGTTGGCAAGTTATTCTCTTCTCAATTGCTCCATTCGCACAAACGAAGATGGCAAGAGTGAAAGAGTTTATGCTCTCTCAGACGTTGGTATAGAGCATATTGGAGGAGATATGTTTGAAAGTGTTCCAAGTGGTGATGCCATTATACTGAAGGTCTTCATCTCTCCCACCCACCAGCAACAAGCAACCATGAGTCAGAGACACCGGAAATGCAACGGTGGCAATGGCCATCGCAGTCGCAAAATCACCGCGAAATGTCAGAAAATCCACCACCGACCAACACCGTGA 558 0.4409 MSSNSKESGTLVPPEVAKVDDPYLYAVLLCLSRVLPAVLNAAVDLNLFDIIAKAQQSSCDDSTNFSASEIASLLPNPHPQLANRLERMLPLLASYSLLNCSIRTNEDGKSERVYALSDVGIEHIGGDMFESVPSGDAIILKVFISPTHQQQATMSQRHRKCNGGNGHRSRKITAKCQKIHHRPTP 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1026 185 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 120 - -
Aed11g1026 185 MobiDBLite consensus disorder prediction 151 170 - -
Aed11g1026 185 PANTHER O-METHYLTRANSFERASE 118 143 IPR016461 GO:0008168
Aed11g1026 185 SUPERFAMILY "Winged helix" DNA-binding domain 20 120 IPR036390 -
Aed11g1026 185 Gene3D - 4 118 IPR036388 -
Aed11g1026 185 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 118 143 - -
Aed11g1026 185 Pfam Dimerisation domain 38 93 IPR012967 GO:0046983
Aed11g1026 185 Gene3D Vaccinia Virus protein VP39 119 143 IPR029063 -
Aed11g1026 185 PANTHER O-METHYLTRANSFERASE 1 120 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1026 Aed-Chr11 16102699 16105312 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1026 11 119 Monolignol Biosynthesis Gene Families AT5G54160 38.532 2.00e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1026 - - gmx:106794104 184.882