Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1025 TCTTATGCCTATATAAACAACAAAAAAAATTGTAAAAAAGTACACAACAACCAAACACTAACTAGTGTAGTTCCTAAAGAAATCAAACAGAGTAAGAAAATGAGTTCCAATACCAAACAGAATCAGCTTCCAATTACAGAGGTAGCAGCAAAGGTCGATGATGCTTACCTCTCTGCTGTGATTCTTTGTTTTAGCAGGGTTTTCCCTGCAATCCTAAATGCTGCCATTGATATCAATTTATTTGATATCATAGCAAAGGCACAAAGTTCATCATCATGTGGTTCAACTTTATTATCAGCCTCTGATATTGCTTCTCTTCTTCCAAATCAACACCCTCAATTGGCTAATAGCCTTGAACGCATGTTGCATTTGTTGGCCAGTTATTCTCTTCTGAATTGCTCCATTCAAACCAATGAAGATGGTAAGAGAGAAAGAGTTTATTCTCTCTCACCCGTTGGTCAATACTTTGCATTTGATAATGAAGGAATCTCCTTGGCCCCTCTATCAAGTTTAGTACATGGCGGATATCACGACCTCTGGTAA 543 0.3757 SYAYINNKKNCKKVHNNQTLTSVVPKEIKQSKKMSSNTKQNQLPITEVAAKVDDAYLSAVILCFSRVFPAILNAAIDINLFDIIAKAQSSSSCGSTLLSASDIASLLPNQHPQLANSLERMLHLLASYSLLNCSIQTNEDGKRERVYSLSPVGQYFAFDNEGISLAPLSSLVHGGYHDLW 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1025 180 SUPERFAMILY "Winged helix" DNA-binding domain 52 157 IPR036390 -
Aed11g1025 180 Gene3D - 33 156 IPR036388 -
Aed11g1025 180 Pfam Dimerisation domain 71 126 IPR012967 GO:0046983
Aed11g1025 180 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 60 180 IPR016461 GO:0008168
Aed11g1025 180 PANTHER O-METHYLTRANSFERASE 34 180 IPR016461 GO:0008168
Aed11g1025 180 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 34 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1025 Aed-Chr11 16099761 16103686 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1025 59 180 Monolignol Biosynthesis Gene Families AT1G33030 42.063 1.84e-18 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1025 - - gmx:106794104 207.608