Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1023 ATGACTACCATTGGTGTGCCACTACCCTCCAACCTTGCGGTTGTGGATGGAAGTCCAGAGTGGCTGAGCAGAGCAGACAATGCATGGCAGCTAATAGCTGCAACCCTAGTCGGCATGCAGAGCGTCCCAGGTCTCATAATACTCTACGGCGGAGCAGTAAAGAAGAAATGGGCAGTGAACTCAGCATTCATGTCGCTCTACGCATTCGCCTGCGTTTTCTTCTGCTGGATCGTCTGGGGCTACAGAATGTCCTTCGGCGACGCGCTTGTTCCCTTCTGGGGGAAGCCGGCGATGTCGCTCGAGCACGCTTATCTCTTCAAGAAGGCGTTTCTGGGCGCATTTCCCAACGCAACGATGGTGTATTTCCAGTGTGTGTTTGCGGCCATTACTCTGATTCTCATCGCTGGGGCTGTGCTTGGGCGCATGAACTTCTATGCTTGGATGCTTTTTGTGCCTCTTTGGCTCACTTTCTCTTACACCTTCACTGCTTTCAGTATATGGAGTACTGGTGGGTTCTTGACCAAGATGGGGATCATTGACTACTCTGGTGGTTATGTCATTCATTTGTCTTCTGGGGTTGCTGGTTTCACGGCTGCATATTGGGTTGGACCGCGGCTGAACAAGGACAGGGAAAGGTTCCCGCCGAACAACATCCTTCTGATGCTGGCGGGAGCAGGGCTGCTGTGGATGGGATGGACGGGGTTCAACGGAGGAGATCCGTACACAGTGAACCAGGATGCTTCCCTGGCCGTCCTCAACACACACGCTTGCACCGCTACCAGCTTGCTAACTTGGGTCATCCTTGATGTCCTCTTCTTCCGTAAGCCTTCTGTCATTGGAGCTGTTCAAGGCATGATCACTGGCCTTGGATGGGCAGCACTTATAATGGGAGTGTTATCCGGCTCAATTCCATGGTTCACCATGATGGTGATCCACAAGAGATCAAAGCTACTCCAGAAGGTCGACGACACAATGGCGGTGTTTCACACTCATGCCATCGCCGGAACCCTAGGAGGACTCCTCACCGGCCTCTTCGCCGATCCAAGGCTCAACATATTGTTCTACGGAGCCGAGAGCCGCTACGTCGGTTTCTTCTACGGATTCGGTTCGAACAGGGTTGGGACCGGGATCCGGCAGATGGGGGTCCAGATCCTCGGGATCGTGTTCGTCATCTTTGTTAACGTCGTTAGCACGAGTTTGATTTGCATCTTCATTAGGTTTTTTGTTCCGTTGAGGATGTCGGAGGAGGATATGGAGATTGGCGATGAGGCTGCTCATGGGGAAGAGGCTTATGCCATATGGGGTCAGGGTGATAAGCTTGAGAACTCGAGTTCTAAGTATGGAAGTTCGTTGTATGATGATGTTGAAACTGGTGGTGCATCCAAGAAGAAGCGTGGTGGTGGCGGCACCGTTGAAATGATGTAA 1425 0.5228 MTTIGVPLPSNLAVVDGSPEWLSRADNAWQLIAATLVGMQSVPGLIILYGGAVKKKWAVNSAFMSLYAFACVFFCWIVWGYRMSFGDALVPFWGKPAMSLEHAYLFKKAFLGAFPNATMVYFQCVFAAITLILIAGAVLGRMNFYAWMLFVPLWLTFSYTFTAFSIWSTGGFLTKMGIIDYSGGYVIHLSSGVAGFTAAYWVGPRLNKDRERFPPNNILLMLAGAGLLWMGWTGFNGGDPYTVNQDASLAVLNTHACTATSLLTWVILDVLFFRKPSVIGAVQGMITGLGWAALIMGVLSGSIPWFTMMVIHKRSKLLQKVDDTMAVFHTHAIAGTLGGLLTGLFADPRLNILFYGAESRYVGFFYGFGSNRVGTGIRQMGVQILGIVFVIFVNVVSTSLICIFIRFFVPLRMSEEDMEIGDEAAHGEEAYAIWGQGDKLENSSSKYGSSLYDDVETGGASKKKRGGGGTVEMM 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1023 474 MobiDBLite consensus disorder prediction 446 474 - -
Aed11g1023 474 SUPERFAMILY Ammonium transporter 21 413 - -
Aed11g1023 474 ProSitePatterns Ammonium transporters signature. 180 205 IPR018047 GO:0008519|GO:0016020|GO:0072488
Aed11g1023 474 Gene3D Ammonium transporter AmtB like domains 11 449 IPR029020 -
Aed11g1023 474 PRINTS Rhesus blood group protein signature 123 139 IPR002229 GO:0005887
Aed11g1023 474 PRINTS Rhesus blood group protein signature 219 237 IPR002229 GO:0005887
Aed11g1023 474 PRINTS Rhesus blood group protein signature 250 272 IPR002229 GO:0005887
Aed11g1023 474 PANTHER AMMONIUM TRANSPORTER MEP2 6 474 IPR001905 GO:0008519|GO:0016020|GO:0072488
Aed11g1023 474 Pfam Ammonium Transporter Family 28 431 IPR024041 GO:0008519|GO:0016020|GO:0072488
Aed11g1023 474 PANTHER AMMONIUM TRANSPORTER 6 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1023 Aed-Chr11 16050924 16053265 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1023 117 471 Inorganic Solute Cotransporters AT2G38290 59.836 7.45e-139 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1023 K03320 - gmx:100787856 867.07